Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RPL7AP49-201ENST00000429522 581 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 MTND1P32-201ENST00000433043 938 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AL591438.1-201ENST00000433508 581 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RPL12P11-201ENST00000439970 501 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RPL23AP76-201ENST00000441860 458 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RPS11P7-201ENST00000442125 465 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC019185.1-201ENST00000442718 389 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC016772.1-201ENST00000444170 1261 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC105399.1-202ENST00000447303 205 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 TPMTP4-201ENST00000450749 678 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC010468.1-201ENST00000461022 817 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 CDC42P3-201ENST00000518493 633 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC022360.1-201ENST00000521058 340 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 OR4C2P-201ENST00000530855 1064 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC018552.1-201ENST00000562099 811 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC005341.1-201ENST00000571086 708 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC018638.7-201ENST00000605836 1114 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC067852.7-201ENST00000623270 535 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AF001550.2-201ENST00000636643 217 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 Z99496.1-201ENST00000469424 1477 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC119744.1-201ENST00000454746 1715 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 TCP11X1-202ENST00000622971 1372 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC011755.1-201ENST00000623763 2049 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 TMSB4XP4-201ENST00000323496 618 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 OR9K1P-201ENST00000326513 941 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 RNU6-304P-201ENST00000364855 107 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 RNU6-157P-201ENST00000383957 107 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 MIR323B-201ENST00000385269 82 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 HSPA8P15-201ENST00000401676 786 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 PAICSP7-201ENST00000419829 962 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC090960.1-201ENST00000421072 306 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 MRPS36P1-201ENST00000421291 307 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 HSPD1P12-201ENST00000429127 1069 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 DYNLL1P7-201ENST00000429273 258 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 TXNP5-201ENST00000441043 315 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AL161636.2-201ENST00000445179 927 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC005229.2-201ENST00000456995 399 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 RPS24P16-201ENST00000497294 392 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 ENPP7P11-201ENST00000505915 627 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC116353.3-201ENST00000511215 249 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 HMGN1P9-201ENST00000515212 298 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC022404.1-201ENST00000555320 273 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 DUXAP1-201ENST00000556632 463 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC009852.2-201ENST00000567898 485 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC002400.1-201ENST00000569310 726 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AL031281.1-201ENST00000604049 488 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC009027.1-201ENST00000604510 479 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AP003973.1-201ENST00000604639 691 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AC023813.4-201ENST00000607580 580 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 AL450489.1-201ENST00000612071 468 ntBASIC5.3□□□□□ -1.56
TRIM54Q9BYV2 RN7SL787P-201ENST00000613000 284 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms