Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ACTR3P3-201ENST00000480448 893 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 RNA5SP446-201ENST00000515955 82 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC010201.1-201ENST00000605051 540 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AL731532.2-201ENST00000623542 1953 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC233968.1-201ENST00000611212 1300 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 USP9YP4-201ENST00000424401 1745 ntBASIC6.4□□□□□ -1.38
SCAPERQ9BY12 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCAPERQ9BY12 AC105074.1-201ENST00000623380 3095 ntBASIC6.4□□□□□ -1.38
SCAPERQ9BY12 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 RNA5SP307-201ENST00000362863 116 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 CDY14P-201ENST00000431260 1014 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 CDY12P-201ENST00000440679 1015 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 CDY13P-201ENST00000445813 1015 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 CDY23P-201ENST00000451661 1014 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AC026403.1-201ENST00000518938 295 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AL121834.1-201ENST00000572284 509 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AC005520.3-201ENST00000602874 370 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AC096553.1-201ENST00000605169 829 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AL354798.1-201ENST00000622505 329 ntBASIC6.4□□□□□ -1.39
SCAPERQ9BY12 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SCAPERQ9BY12 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 TET1P1-201ENST00000426627 2301 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AL672167.1-204ENST00000641875 3017 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 MIR483-201ENST00000385070 76 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AL590704.1-201ENST00000402856 794 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AC114814.2-201ENST00000419195 485 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AL691449.1-201ENST00000426570 421 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AC091286.1-201ENST00000431233 461 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 snoU13.24-201ENST00000458998 104 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 PAICSP4-201ENST00000517543 1253 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AC022655.2-201ENST00000577280 318 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 AC009093.8-201ENST00000641769 292 ntBASIC6.39□□□□□ -1.39
SCAPERQ9BY12 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.39□□□□□ -1.39
SCAPERQ9BY12 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 RNU1-83P-201ENST00000363426 164 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 RNU6-213P-201ENST00000384051 104 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 SNORA74D-201ENST00000516404 141 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 MIR3200-201ENST00000580767 85 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 Z98200.1-201ENST00000607298 470 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AC084757.4-201ENST00000616350 526 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AL357559.1-201ENST00000622228 274 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AC007546.2-201ENST00000623996 360 ntBASIC6.38□□□□□ -1.39
SCAPERQ9BY12 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SCAPERQ9BY12 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms