Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL110118.1-201ENST00000553543 400 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 AC068790.7-201ENST00000602347 528 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 AC130352.1-201ENST00000602979 661 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 AC083865.1-201ENST00000636634 831 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 AC006927.2-201ENST00000639256 389 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 MTND4P5-201ENST00000435821 1374 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 DDX43P2-201ENST00000604753 1354 ntBASIC5.79□□□□□ -1.48
SALL3Q9BXA9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SALL3Q9BXA9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 RNU6-468P-201ENST00000384003 109 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 RNU6-906P-201ENST00000384700 70 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 HMGB1P13-201ENST00000406019 642 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC009518.2-201ENST00000418056 731 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL121878.1-201ENST00000418638 859 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 FABP7P1-201ENST00000424004 391 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC005154.2-201ENST00000438110 379 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 ARF4P4-201ENST00000439608 520 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 MTCYBP12-201ENST00000440559 1134 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 Z99127.2-201ENST00000441426 334 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 H2AFZP6-201ENST00000444403 394 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL031584.1-201ENST00000447169 754 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 RAP1BP2-201ENST00000478270 544 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 RPL36AP41-201ENST00000493820 306 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 RNU1-6P-201ENST00000516290 144 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 OR8A2P-201ENST00000528631 952 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AP000919.1-202ENST00000581139 1264 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL358072.1-201ENST00000604156 575 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 CUL4AP1-201ENST00000514750 1863 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AC017002.4-201ENST00000604721 1525 ntBASIC5.78□□□□□ -1.48
SALL3Q9BXA9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
SALL3Q9BXA9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 SNORD116-1-201ENST00000384335 95 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 DPPA2P2-201ENST00000418220 897 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC234781.4-201ENST00000419384 244 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL590762.4-201ENST00000425885 253 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 KCTD10P1-201ENST00000434203 625 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 ZNF886P-201ENST00000450781 723 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 NAP1L1P3-201ENST00000462291 880 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC012123.2-201ENST00000485809 248 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AP001922.4-201ENST00000526967 290 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC084373.1-201ENST00000603311 235 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC093673.2-201ENST00000609674 331 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AC004232.3-201ENST00000622977 525 ntBASIC5.77□□□□□ -1.49
SALL3Q9BXA9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.77□□□□□ -1.49
SALL3Q9BXA9 AL390862.1-201ENST00000635467 1469 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms