Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC021483.2-201ENST00000567415 758 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC087683.1-201ENST00000591187 441 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AL109618.2-201ENST00000605527 211 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC000068.2-201ENST00000608816 460 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 RMST_10.1-201ENST00000616309 154 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AL359757.1-201ENST00000623176 255 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092681.1-201ENST00000297369 291 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU6-1119P-201ENST00000384349 108 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 U3.28-201ENST00000391249 210 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 TAF9BP2-201ENST00000400856 499 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AL589994.1-201ENST00000404962 340 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SKP142-201ENST00000411236 328 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC008173.1-201ENST00000418901 264 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC234781.4-201ENST00000419384 244 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC122718.1-201ENST00000439448 744 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC233982.1-201ENST00000451247 436 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC026348.1-201ENST00000462549 1053 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 FAM133DP-201ENST00000464802 691 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SL214P-201ENST00000487317 265 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SL284P-201ENST00000498823 275 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC026414.1-201ENST00000504046 698 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC004069.2-201ENST00000505438 1114 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC109471.1-201ENST00000511631 612 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 FABP5P5-201ENST00000515537 406 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 HIGD1AP10-201ENST00000527837 282 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AP002963.1-201ENST00000530590 184 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC084757.1-201ENST00000559987 490 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC106734.1-201ENST00000568646 663 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC010547.7-201ENST00000570323 333 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 U73023.1-201ENST00000603134 700 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AL137072.1-201ENST00000603444 466 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 Z99129.1-201ENST00000612510 255 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC138932.5-201ENST00000617759 563 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01808-202ENST00000641680 1116 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AL929601.4-201ENST00000613011 1341 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 AC010266.2-201ENST00000564741 3255 ntBASIC5.72□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms