Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC42Q96M95 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC42Q96M95 OR4K15-201ENST00000305051 1216 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC092642.1-201ENST00000392417 425 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 ARL2BPP10-201ENST00000446487 531 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC074386.1-201ENST00000476560 767 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 RPS4XP14-201ENST00000493072 781 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 AGGF1P3-201ENST00000493675 1213 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC018442.3-201ENST00000523025 183 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 MIR4727-201ENST00000622232 55 ntBASIC4.54□□□□□ -1.68
CCDC42Q96M95 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC42Q96M95 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC42Q96M95 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
CCDC42Q96M95 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 MAPK10-253ENST00000641010 4072 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 RLIMP2-201ENST00000427891 1563 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 SNORA37-201ENST00000384504 129 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 MIR105-2-201ENST00000385083 81 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 SNORA3C-201ENST00000408792 125 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC092647.1-201ENST00000420654 287 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 YWHAEP5-201ENST00000431545 765 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 FTH1P16-201ENST00000435241 552 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 RN7SL354P-201ENST00000469282 294 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 RPS29P19-201ENST00000479709 171 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC083982.1-201ENST00000485679 344 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 RPS26P15-201ENST00000488067 348 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC122134.1-201ENST00000565664 1104 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 MIR4436B2-201ENST00000581415 91 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 MIR4436B1-201ENST00000583272 91 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC068790.5-201ENST00000602741 355 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 QTRT1P1-201ENST00000604344 1078 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC012409.3-201ENST00000611343 981 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC078899.5-201ENST00000612475 178 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC103858.2-201ENST00000621471 543 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC092162.3-201ENST00000624511 1624 ntBASIC4.53□□□□□ -1.68
CCDC42Q96M95 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC42Q96M95 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC42Q96M95 AC010300.1-201ENST00000600671 5134 ntBASIC4.53□□□□□ -1.69
CCDC42Q96M95 AL592148.3-201ENST00000608771 2646 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC42Q96M95 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 AL583835.1-201ENST00000399570 407 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC42Q96M95 RAC1P3-201ENST00000416129 580 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC011998.1-201ENST00000433403 117 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC105233.1-201ENST00000498840 781 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 PGBD4P4-201ENST00000509673 613 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 RNA5SP73-201ENST00000516744 108 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC090312.1-201ENST00000580637 348 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms