Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 ARAFP1-201ENST00000422172 605 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 GTF2IP2-201ENST00000424290 697 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 MORF4L1P4-201ENST00000450245 976 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AL133244.1-201ENST00000456007 258 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 IFITM8P-201ENST00000522529 394 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 CYP4A43P-201ENST00000568156 121 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC005034.4-201ENST00000603612 899 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AL031666.3-201ENST00000609320 1006 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC015813.4-201ENST00000610469 179 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC006065.6-201ENST00000625201 545 ntBASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL592148.3-201ENST00000608771 2646 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 SNORA71.2-201ENST00000364941 134 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 RNU6-178P-201ENST00000384631 104 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MIR659-201ENST00000384963 97 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MT-RNR1-201ENST00000389680 954 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 OR1F12-201ENST00000402365 945 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MIR1911-201ENST00000410783 80 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL160275.2-201ENST00000412010 394 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 RPL18P10-201ENST00000425606 538 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 C4BPAP2-201ENST00000428434 478 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 RPL23AP43-201ENST00000446445 471 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 VN1R32P-201ENST00000452234 905 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 RPL10P17-201ENST00000453852 316 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MTCYBP14-201ENST00000457471 715 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 HPRT1P1-201ENST00000509498 657 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AC022616.2-201ENST00000523185 300 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 FAM106CP-201ENST00000582212 507 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL589935.2-201ENST00000616471 1231 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AC009704.2-201ENST00000618739 483 ntBASIC4.51□□□□□ -1.69
C9orf72Q96LT7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf72Q96LT7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 OR10J6P-201ENST00000289731 930 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 AC126755.2-208ENST00000327792 462 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 AC138969.1-213ENST00000331436 462 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 RNU6-697P-201ENST00000363348 107 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 SNORA62-201ENST00000365493 153 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 RPS20P14-201ENST00000412545 360 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 UQCRBP1-201ENST00000421129 336 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 COX6CP17-201ENST00000421389 185 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 ELOCP3-201ENST00000439303 348 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.5□□□□□ -1.69
C9orf72Q96LT7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
C9orf72Q96LT7 RPS27AP17-201ENST00000463344 455 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms