Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP47Q96K76 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
USP47Q96K76 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USP47Q96K76 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP47Q96K76 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP47Q96K76 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP47Q96K76 RNU1-15P-201ENST00000353977 144 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP47Q96K76 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP47Q96K76 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.9□□□□□ -1.47
USP47Q96K76 PPIAP31-201ENST00000405422 495 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 AL035696.2-201ENST00000407941 709 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 RN7SKP182-201ENST00000410772 298 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 RN7SKP97-201ENST00000410966 333 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 LINC01881-201ENST00000416103 412 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 OR13Z1P-201ENST00000416141 834 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.9□□□□□ -1.47
USP47Q96K76 GEMIN8P3-201ENST00000445417 720 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 AP002812.1-201ENST00000495378 474 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.9□□□□□ -1.47
USP47Q96K76 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.9□□□□□ -1.47
USP47Q96K76 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.9□□□□□ -1.47
USP47Q96K76 AL031666.3-201ENST00000609320 1006 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP47Q96K76 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP47Q96K76 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.9□□□□□ -1.47
USP47Q96K76 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.89□□□□□ -1.47
USP47Q96K76 HCFC2P1-201ENST00000392864 1592 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.89□□□□□ -1.47
USP47Q96K76 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USP47Q96K76 RN7SKP199-201ENST00000410325 305 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.89□□□□□ -1.47
USP47Q96K76 KATNBL1P2-201ENST00000433311 835 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 AL356276.2-201ENST00000435919 558 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.89□□□□□ -1.47
USP47Q96K76 PARP4P3-201ENST00000510265 317 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 MTCO1P49-201ENST00000523429 802 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.89□□□□□ -1.47
USP47Q96K76 AC093524.1-201ENST00000564266 1094 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 AC010547.7-201ENST00000570323 333 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 AC099676.1-201ENST00000608886 657 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 AC138907.10-201ENST00000623708 983 ntBASIC5.89□□□□□ -1.47
USP47Q96K76 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.89□□□□□ -1.47
USP47Q96K76 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP47Q96K76 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
USP47Q96K76 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.88□□□□□ -1.47
USP47Q96K76 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP47Q96K76 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.88□□□□□ -1.47
USP47Q96K76 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
USP47Q96K76 RNA5SP171-201ENST00000391071 115 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 RNU6-628P-201ENST00000410675 107 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 RCC2P2-201ENST00000422174 918 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 RPL23AP46-201ENST00000438548 490 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.88□□□□□ -1.47
USP47Q96K76 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.88□□□□□ -1.47
USP47Q96K76 LDHBP3-201ENST00000514909 822 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP47Q96K76 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.88□□□□□ -1.47
USP47Q96K76 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.88□□□□□ -1.47
USP47Q96K76 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.88□□□□□ -1.47
USP47Q96K76 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.88□□□□□ -1.47
USP47Q96K76 AC006133.1-201ENST00000617106 264 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 AL121890.2-201ENST00000617644 465 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 AC090506.2-201ENST00000624521 419 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 AC092435.4-201ENST00000623012 4159 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
USP47Q96K76 AC006971.1-201ENST00000407916 4486 ntBASIC5.88□□□□□ -1.47
USP47Q96K76 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP47Q96K76 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP47Q96K76 CYP1D1P-201ENST00000416662 1433 ntBASIC5.87□□□□□ -1.47
USP47Q96K76 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP47Q96K76 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP47Q96K76 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP47Q96K76 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.87□□□□□ -1.47
USP47Q96K76 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.87□□□□□ -1.47
USP47Q96K76 NDUFB4P12-201ENST00000513465 390 ntBASIC5.87□□□□□ -1.47
USP47Q96K76 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.87□□□□□ -1.47
USP47Q96K76 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.87□□□□□ -1.47
USP47Q96K76 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.87□□□□□ -1.47
USP47Q96K76 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.87□□□□□ -1.47
USP47Q96K76 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.87□□□□□ -1.47
USP47Q96K76 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.87□□□□□ -1.47
USP47Q96K76 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.87□□□□□ -1.47
USP47Q96K76 TMEM30CP-203ENST00000637814 1035 ntBASIC5.87□□□□□ -1.47
USP47Q96K76 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
USP47Q96K76 AC116667.1-201ENST00000604855 2072 ntBASIC5.87□□□□□ -1.47
USP47Q96K76 AC092162.3-201ENST00000624511 1624 ntBASIC5.86□□□□□ -1.47
USP47Q96K76 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms