Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.15□□□□□ -1.58
HMGB4Q8WW32 RNU4-68P-201ENST00000364314 141 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 RN7SKP153-201ENST00000365026 316 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 Y_RNA.472-201ENST00000384322 102 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 MIR525-201ENST00000384978 85 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 Z97832.1-201ENST00000402490 328 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 RAB28P1-201ENST00000411517 641 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 GTF2IP2-201ENST00000424290 697 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 BX276092.6-201ENST00000430476 250 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 CBX1P4-201ENST00000439415 457 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 CR769776.1-201ENST00000441254 787 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 HMGB3P6-201ENST00000444896 598 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 Z73417.1-201ENST00000447373 778 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AL589880.1-201ENST00000448271 287 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 RPS6P2-201ENST00000454208 705 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 BX276092.8-201ENST00000455722 250 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC005229.2-201ENST00000456995 399 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC091959.2-201ENST00000477363 321 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AL161747.1-201ENST00000480068 358 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 RPL7P41-201ENST00000485823 957 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AL035404.1-201ENST00000497982 568 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 MTND4LP2-201ENST00000502312 285 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 IGBP1P4-201ENST00000503202 879 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 HPRT1P2-201ENST00000505250 544 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC112673.1-201ENST00000513168 575 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 MTCO3P15-201ENST00000526563 574 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 BGLT3-201ENST00000564523 994 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 MIR4737-201ENST00000583979 81 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC015712.7-201ENST00000615211 635 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AP000346.3-201ENST00000622821 210 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AP000676.4-201ENST00000624659 623 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AC104446.1-201ENST00000613728 1321 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HMGB4Q8WW32 AL022311.1-201ENST00000623726 19416 ntBASIC5.15□□□□□ -1.59
HMGB4Q8WW32 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 RNU6-398P-201ENST00000384143 109 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AL136310.1-201ENST00000404926 654 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 RPS4XP9-201ENST00000405151 780 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 SNORA11C-201ENST00000408532 129 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PCNPP4-201ENST00000414817 517 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AL133482.1-201ENST00000415988 498 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 OR2X1P-201ENST00000421144 687 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC124944.2-201ENST00000429866 1242 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 NDUFB4P8-201ENST00000435351 367 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AL138878.2-201ENST00000440581 1241 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC011753.3-201ENST00000443436 406 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 RPL5P22-201ENST00000480199 884 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 METTL15P1-201ENST00000481421 1045 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC010350.1-201ENST00000504908 231 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms