Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 HSFY1P1-201ENST00000423928 1178 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 USP9YP2-201ENST00000504503 1000 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC106806.2-201ENST00000509365 500 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 USP9YP1-201ENST00000513521 1002 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 FTH1P11-201ENST00000517577 551 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC069061.3-201ENST00000582254 823 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 MIR3653-201ENST00000625572 110 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LARP1BP1-201ENST00000506036 1359 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 HMGB3P5-201ENST00000428894 612 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL935212.3-201ENST00000450729 284 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 HSPE1P5-201ENST00000561489 272 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC073869.7-201ENST00000640874 297 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 CPHL1P-201ENST00000461341 3407 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC108467.2-201ENST00000617640 1597 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNA5SP317-201ENST00000410176 116 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNA5SP311-201ENST00000411290 116 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 LINC00993-201ENST00000420453 540 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL591363.1-201ENST00000450091 483 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC245028.2-201ENST00000458673 253 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNU6ATAC28P-201ENST00000459249 118 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 PGBD4P4-201ENST00000509673 613 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNA5SP315-201ENST00000516340 116 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 RNA5SP312-201ENST00000517068 116 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 NPM1P6-201ENST00000521088 871 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC006363.1-201ENST00000603806 463 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC120036.2-201ENST00000509729 1474 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 CCNG2P1-201ENST00000549521 1000 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AL158163.1-201ENST00000603915 1649 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AL445437.1-201ENST00000623157 3087 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 SLC2A3P1-201ENST00000519666 1451 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 RNA5SP119-201ENST00000362715 117 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 COX6B1P7-201ENST00000430845 235 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 NANOGP10-201ENST00000453325 895 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC010460.1-201ENST00000507087 466 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 RNA5SP519-201ENST00000516480 119 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 CASC19-284ENST00000642142 1868 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 SPRR2C-201ENST00000290702 219 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 RHEBP2-201ENST00000450289 600 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 ATP5G1P3-201ENST00000463301 410 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 RPL35P6-201ENST00000490024 372 ntBASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE1Q8NF91 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms