Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 IGHV3-63-201ENST00000518422 341 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 VTA1P2-201ENST00000520205 911 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC090819.1-201ENST00000523800 1111 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 UBTFL9-201ENST00000534504 1148 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 OR1AB1P-201ENST00000585564 761 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC073091.2-201ENST00000603205 907 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AL139395.1-201ENST00000603662 160 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AP000894.4-201ENST00000610185 483 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AL133370.2-201ENST00000619934 439 ntBASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUDCD3Q8IVD9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC009313.2-201ENST00000417893 1941 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC240504.1-201ENST00000395709 845 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AL034403.1-201ENST00000399414 885 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AL607077.1-201ENST00000401718 499 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AL645733.1-201ENST00000402250 217 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 RPL23AP48-201ENST00000406913 488 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 RNU4-34P-201ENST00000410431 124 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 BX510359.2-201ENST00000417920 305 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 SEC63P1-201ENST00000425785 1258 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 UBE2V2P3-201ENST00000433562 437 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AL157884.3-201ENST00000448273 1184 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC110749.1-201ENST00000462007 357 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 RPSAP50-201ENST00000481955 852 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 RPS6P4-201ENST00000494693 758 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC008953.1-201ENST00000497334 318 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC117525.1-201ENST00000515228 503 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC123786.2-201ENST00000603459 275 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AL133338.2-201ENST00000604292 736 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC010200.2-201ENST00000605098 235 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC019131.2-201ENST00000609071 870 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC007342.9-201ENST00000623877 1385 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 LINC02471-203ENST00000641941 4752 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
NUDCD3Q8IVD9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC010329.2-201ENST00000595195 2737 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 RNA5SP507-201ENST00000363603 121 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 MT-TP-201ENST00000387461 68 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 RN7SKP213-201ENST00000410746 298 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 RPL23AP4-201ENST00000427757 463 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 NANOGP6-201ENST00000429190 847 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 MTCO1P45-201ENST00000431457 267 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC093716.1-201ENST00000435923 377 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 ELOCP8-201ENST00000439309 332 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 ELOCP15-201ENST00000442090 332 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 SUMO2P1-206ENST00000445436 284 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC063943.1-201ENST00000465434 453 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 STRADBP1-201ENST00000478954 1281 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 RPS4XP14-201ENST00000493072 781 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC017037.1-201ENST00000508460 471 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 HNRNPKP5-201ENST00000515300 253 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms