Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 ZNF90P1-201ENST00000480493 1951 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL603865.2-201ENST00000401679 213 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 TBCAP2-201ENST00000416175 326 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 BX510359.3-201ENST00000422168 306 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC000041.1-201ENST00000439655 175 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL137845.2-201ENST00000444292 988 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 NPM1P19-201ENST00000450070 712 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 PTGES3P5-201ENST00000455109 434 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RN7SL177P-201ENST00000476596 299 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC016687.1-201ENST00000482574 353 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RN7SL97P-201ENST00000486780 299 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RN7SL629P-201ENST00000489622 285 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RPS4XP14-201ENST00000493072 781 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC118282.2-201ENST00000508739 374 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RNU6-319P-201ENST00000516025 108 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 BUD31P1-201ENST00000521828 359 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 OR4A2P-201ENST00000527276 913 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC023050.2-201ENST00000544968 387 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC011453.2-201ENST00000603737 729 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC079610.2-201ENST00000604818 690 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC012213.4-201ENST00000606457 354 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 RNU6-84P-201ENST00000607737 102 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 PART1_2.1-201ENST00000612397 250 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL392048.1-201ENST00000613946 534 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC019080.5-201ENST00000624891 757 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC021755.1-201ENST00000559747 1447 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AL359715.4-201ENST00000606629 1436 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 AC008758.3-201ENST00000507003 1829 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC068870.3-201ENST00000625077 2536 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 Y_RNA.505-201ENST00000384489 102 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MIR765-201ENST00000390226 114 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 HMGB1P13-201ENST00000406019 642 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RNA5SP345-201ENST00000410646 108 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AL031779.1-201ENST00000415663 330 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 VN1R31P-201ENST00000417498 730 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RGS17P1-201ENST00000423358 553 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 CKS1BP6-201ENST00000424932 240 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 DEFB130D-201ENST00000426866 237 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 NDUFA5P10-201ENST00000432147 357 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RPL12P18-201ENST00000437175 325 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MTND1P34-201ENST00000438556 671 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RAB28P3-201ENST00000448325 597 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms