Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC005341.1-201ENST00000571086 708 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 ZNF92P3-201ENST00000596594 954 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AC110760.3-201ENST00000598794 467 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AL358072.1-201ENST00000604156 575 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AL138478.1-201ENST00000612252 832 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 EIF3FP1-201ENST00000613970 806 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 uc_338.18-201ENST00000615451 175 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AL158163.2-201ENST00000619110 700 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AP003497.2-201ENST00000624220 967 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 CASC19-221ENST00000641309 1382 ntBASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A4Q53GD3 AC120338.1-201ENST00000625074 1541 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RN7SKP104-201ENST00000362605 328 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 HMGB3P7-201ENST00000400214 611 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RNU2-22P-201ENST00000411266 212 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 OR5M12P-201ENST00000423388 929 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 HMGB3P6-201ENST00000444896 598 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC112492.1-201ENST00000449607 712 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RPS29P33-201ENST00000456717 146 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC092324.1-201ENST00000468671 324 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC108471.1-201ENST00000513977 287 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 EIF3KP3-201ENST00000514461 639 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC007834.2-201ENST00000536310 343 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC137768.1-201ENST00000549998 553 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 MTND3P13-201ENST00000574391 343 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC069366.1-201ENST00000583159 838 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC025588.2-201ENST00000604851 466 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AL583856.2-201ENST00000606298 543 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 AC007786.3-201ENST00000615154 596 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RBPJP2-201ENST00000618187 1444 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 INTS6P1-201ENST00000504674 2530 ntBASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A4Q53GD3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC133552.1-201ENST00000569988 4007 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms