Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 RNU1-13P-201ENST00000384499 162 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 RPS26P8-201ENST00000393490 348 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 SNORA11-201ENST00000408789 128 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 SEPT7P8-201ENST00000413308 775 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 GNG5P5-201ENST00000420444 220 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.1□□□□□ -1.59
GABPAQ06546 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.1□□□□□ -1.59
GABPAQ06546 VN1R32P-201ENST00000452234 905 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 AC112206.1-201ENST00000468416 477 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GABPAQ06546 RPS27AP13-201ENST00000498403 237 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.1□□□□□ -1.59
GABPAQ06546 AC010374.1-201ENST00000503762 1237 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GABPAQ06546 AL592156.1-201ENST00000508758 304 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 RNA5SP519-201ENST00000516480 119 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 RNA5SP73-201ENST00000516744 108 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.1□□□□□ -1.59
GABPAQ06546 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.1□□□□□ -1.59
GABPAQ06546 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.1□□□□□ -1.59
GABPAQ06546 AC067805.1-201ENST00000559344 470 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.1□□□□□ -1.59
GABPAQ06546 AC016911.1-201ENST00000613297 452 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 ZYXP1-201ENST00000617638 118 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
GABPAQ06546 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
GABPAQ06546 AC015871.5-202ENST00000623252 701 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 AL672167.1-203ENST00000641299 2975 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABPAQ06546 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABPAQ06546 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GABPAQ06546 Y_RNA.126-201ENST00000363382 111 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 RNU6-618P-201ENST00000363518 112 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 RNA5SP175-201ENST00000364275 119 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AL139039.2-201ENST00000407436 479 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 OR8G2P-201ENST00000412796 908 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 RPL6P29-201ENST00000414863 865 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABPAQ06546 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.09□□□□□ -1.59
GABPAQ06546 VDAC1P6-201ENST00000430062 855 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.09□□□□□ -1.59
GABPAQ06546 AC114755.5-201ENST00000447760 831 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 MTND6P32-201ENST00000457611 483 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 RPS20P4-201ENST00000461659 355 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 RPL7AP28-201ENST00000464513 571 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GABPAQ06546 AC105918.1-201ENST00000474399 838 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.09□□□□□ -1.59
GABPAQ06546 AC098583.1-201ENST00000480875 255 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.09□□□□□ -1.59
GABPAQ06546 MTCO1P35-201ENST00000515270 228 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.09□□□□□ -1.59
GABPAQ06546 AC084824.1-201ENST00000550917 1005 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GABPAQ06546 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.09□□□□□ -1.59
GABPAQ06546 AC005034.4-201ENST00000603612 899 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 Z98200.1-201ENST00000607298 470 ntBASIC5.09□□□□□ -1.59
GABPAQ06546 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GABPAQ06546 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABPAQ06546 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
GABPAQ06546 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GABPAQ06546 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GABPAQ06546 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GABPAQ06546 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GABPAQ06546 OR10AB1P-202ENST00000641219 1686 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 AP001002.1-201ENST00000625148 1513 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 MFSD8-220ENST00000641243 1422 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 CASC19-204ENST00000641001 2055 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GABPAQ06546 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
GABPAQ06546 MIR365B-201ENST00000362317 111 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC083799.1-201ENST00000366451 910 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 AL022722.2-201ENST00000402519 180 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 RNA5SP36-201ENST00000410197 133 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC234781.4-201ENST00000419384 244 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms