Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC091489.2-201ENST00000566263 604 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 MIR4666A-201ENST00000580160 79 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.82□□□□□ -1.48
YBX1P67809 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 AL049634.3-201ENST00000604968 457 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AL136221.1-201ENST00000621449 509 ntBASIC5.82□□□□□ -1.48
YBX1P67809 FER-210ENST00000628534 558 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 OR52B5P-202ENST00000641118 1110 ntBASIC5.82□□□□□ -1.48
YBX1P67809 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 Z99496.1-201ENST00000469424 1477 ntBASIC5.82□□□□□ -1.48
YBX1P67809 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 AC135352.1-201ENST00000506173 1418 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC003985.2-201ENST00000562268 1669 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AL731532.1-201ENST00000623972 4236 ntBASIC5.82□□□□□ -1.48
YBX1P67809 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 DCAF13P3-201ENST00000561147 1334 ntBASIC5.81□□□□□ -1.48
YBX1P67809 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 AC123769.1-201ENST00000530992 3192 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
YBX1P67809 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
YBX1P67809 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
YBX1P67809 AL356057.2-201ENST00000403318 432 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AP000357.1-201ENST00000409926 1165 ntBASIC5.81□□□□□ -1.48
YBX1P67809 RN7SKP285-201ENST00000410137 318 ntBASIC5.81□□□□□ -1.48
YBX1P67809 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.81□□□□□ -1.48
YBX1P67809 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 RPL31P54-201ENST00000429803 370 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AL365184.2-201ENST00000431139 435 ntBASIC5.81□□□□□ -1.48
YBX1P67809 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.81□□□□□ -1.48
YBX1P67809 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 PDSS1P2-201ENST00000449397 678 ntBASIC5.81□□□□□ -1.48
YBX1P67809 PPIAP27-201ENST00000453800 265 ntBASIC5.81□□□□□ -1.48
YBX1P67809 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 AC009963.3-201ENST00000458090 486 ntBASIC5.81□□□□□ -1.48
YBX1P67809 GAPDHP39-201ENST00000481866 979 ntBASIC5.81□□□□□ -1.48
YBX1P67809 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.81□□□□□ -1.48
YBX1P67809 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 AC002310.3-201ENST00000569728 723 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AC012146.2-201ENST00000576545 416 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AP005119.2-201ENST00000579735 1105 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.81□□□□□ -1.48
YBX1P67809 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 AC008507.3-201ENST00000585753 472 ntBASIC5.81□□□□□ -1.48
YBX1P67809 VN1R79P-201ENST00000593540 513 ntBASIC5.81□□□□□ -1.48
YBX1P67809 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 BNIP3P4-201ENST00000604946 565 ntBASIC5.81□□□□□ -1.48
YBX1P67809 MIR6809-201ENST00000612189 116 ntBASIC5.81□□□□□ -1.48
YBX1P67809 AP002505.2-201ENST00000623585 696 ntBASIC5.81□□□□□ -1.48
YBX1P67809 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.81□□□□□ -1.48
YBX1P67809 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
YBX1P67809 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
YBX1P67809 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 AC011933.2-201ENST00000578539 2790 ntBASIC5.8□□□□□ -1.48
YBX1P67809 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
YBX1P67809 OR10R3P-201ENST00000361688 942 ntBASIC5.8□□□□□ -1.48
YBX1P67809 RNA5SP273-201ENST00000362484 113 ntBASIC5.8□□□□□ -1.48
YBX1P67809 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
YBX1P67809 RNU4-31P-201ENST00000384211 141 ntBASIC5.8□□□□□ -1.48
YBX1P67809 Y_RNA.535-201ENST00000384612 99 ntBASIC5.8□□□□□ -1.48
YBX1P67809 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 MTCYBP36-201ENST00000404146 440 ntBASIC5.8□□□□□ -1.48
YBX1P67809 SNRPEP6-201ENST00000407465 277 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 OFD1P18Y-201ENST00000420889 959 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 AC007742.1-201ENST00000425789 329 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.8□□□□□ -1.48
YBX1P67809 NPM1P24-201ENST00000428039 894 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms