Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC092647.1-201ENST00000420654 287 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AL592293.2-201ENST00000422292 996 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AC234779.1-201ENST00000425910 285 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AC004975.1-201ENST00000428733 208 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 PTMAP3-201ENST00000447474 330 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AC000111.2-201ENST00000448200 210 ntBASIC3.84□□□□□ -1.79
UBA52P62987 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.84□□□□□ -1.79
UBA52P62987 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 RPL23AP71-201ENST00000470966 469 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AC007537.2-201ENST00000472093 511 ntBASIC3.84□□□□□ -1.79
UBA52P62987 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.84□□□□□ -1.79
UBA52P62987 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.84□□□□□ -1.79
UBA52P62987 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.84□□□□□ -1.79
UBA52P62987 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.84□□□□□ -1.79
UBA52P62987 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UBA52P62987 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 AC083899.2-201ENST00000423285 1376 ntBASIC3.84□□□□□ -1.79
UBA52P62987 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
UBA52P62987 CDY11P-201ENST00000447168 1651 ntBASIC3.84□□□□□ -1.8
UBA52P62987 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UBA52P62987 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.8
UBA52P62987 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
UBA52P62987 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 OR56B2P-202ENST00000641377 2453 ntBASIC3.83□□□□□ -1.8
UBA52P62987 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 RNA5SP345-201ENST00000410646 108 ntBASIC3.83□□□□□ -1.8
UBA52P62987 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.83□□□□□ -1.8
UBA52P62987 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.83□□□□□ -1.8
UBA52P62987 AL732292.1-201ENST00000426692 226 ntBASIC3.83□□□□□ -1.8
UBA52P62987 RPL23AP25-201ENST00000430973 463 ntBASIC3.83□□□□□ -1.8
UBA52P62987 CYCSP11-201ENST00000436426 315 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.83□□□□□ -1.8
UBA52P62987 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.83□□□□□ -1.8
UBA52P62987 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
UBA52P62987 RNU1-6P-201ENST00000516290 144 ntBASIC3.83□□□□□ -1.8
UBA52P62987 NPM1P6-201ENST00000521088 871 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.83□□□□□ -1.8
UBA52P62987 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 AL049839.1-201ENST00000556151 657 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.83□□□□□ -1.8
UBA52P62987 RN7SL802P-201ENST00000577858 299 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
UBA52P62987 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC005191.1-201ENST00000603950 358 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC005962.2-201ENST00000611427 652 ntBASIC3.83□□□□□ -1.8
UBA52P62987 AC002044.3-201ENST00000623314 541 ntBASIC3.83□□□□□ -1.8
UBA52P62987 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 OR52H1-202ENST00000641796 1061 ntBASIC3.83□□□□□ -1.8
UBA52P62987 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 AC017007.4-201ENST00000503353 1352 ntBASIC3.83□□□□□ -1.8
UBA52P62987 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 AL442639.1-201ENST00000625030 1899 ntBASIC3.83□□□□□ -1.8
UBA52P62987 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.83□□□□□ -1.8
UBA52P62987 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UBA52P62987 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBA52P62987 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.82□□□□□ -1.8
UBA52P62987 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
UBA52P62987 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 Y_RNA.126-201ENST00000363382 111 ntBASIC3.82□□□□□ -1.8
UBA52P62987 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.82□□□□□ -1.8
UBA52P62987 MIR1193-201ENST00000408109 78 ntBASIC3.82□□□□□ -1.8
UBA52P62987 RPS23P10-201ENST00000416185 486 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC013470.3-201ENST00000420252 1194 ntBASIC3.82□□□□□ -1.8
UBA52P62987 UQCRBP1-201ENST00000421129 336 ntBASIC3.82□□□□□ -1.8
UBA52P62987 RPEP3-201ENST00000425462 676 ntBASIC3.82□□□□□ -1.8
UBA52P62987 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.82□□□□□ -1.8
UBA52P62987 AC023141.6-201ENST00000429418 337 ntBASIC3.82□□□□□ -1.8
UBA52P62987 PRELID3BP10-201ENST00000431957 584 ntBASIC3.82□□□□□ -1.8
UBA52P62987 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.82□□□□□ -1.8
UBA52P62987 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.82□□□□□ -1.8
UBA52P62987 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBA52P62987 RN7SKP21-201ENST00000516503 220 ntBASIC3.82□□□□□ -1.8
UBA52P62987 MTCYBP19-201ENST00000517463 1124 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC138701.1-201ENST00000524329 714 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms