Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RPL39P62891 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.84□□□□□ -1.95
RPL39P62891 MTCO1P11-201ENST00000429111 1528 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
RPL39P62891 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RPL39P62891 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RPL39P62891 OR11H4-201ENST00000315409 1082 ntBASIC2.84□□□□□ -1.95
RPL39P62891 RNA5SP502-201ENST00000362694 119 ntBASIC2.84□□□□□ -1.95
RPL39P62891 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RPL39P62891 HMGN2P8-201ENST00000391458 268 ntBASIC2.84□□□□□ -1.95
RPL39P62891 CCL7-202ENST00000394627 696 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 GTF3AP1-201ENST00000416942 1004 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 KCTD9P3-201ENST00000434597 1169 ntBASIC2.84□□□□□ -1.95
RPL39P62891 RPL7P28-201ENST00000437739 740 ntBASIC2.84□□□□□ -1.95
RPL39P62891 RN7SL93P-201ENST00000463035 293 ntBASIC2.84□□□□□ -1.95
RPL39P62891 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
RPL39P62891 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC2.84□□□□□ -1.95
RPL39P62891 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.84□□□□□ -1.95
RPL39P62891 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 MTND1P6-201ENST00000523621 946 ntBASIC2.84□□□□□ -1.95
RPL39P62891 OR7E10P-201ENST00000526420 991 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC105233.3-201ENST00000531125 744 ntBASIC2.84□□□□□ -1.95
RPL39P62891 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPL39P62891 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 AC090515.3-201ENST00000560431 315 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.84□□□□□ -1.95
RPL39P62891 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 MIR4646-201ENST00000580775 63 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.84□□□□□ -1.95
RPL39P62891 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.84□□□□□ -1.95
RPL39P62891 EIF1P6-201ENST00000600054 334 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC114878.2-201ENST00000604863 1251 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.84□□□□□ -1.95
RPL39P62891 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RPL39P62891 MAPK10-373ENST00000641983 6772 ntBASIC2.84□□□□□ -1.95
RPL39P62891 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPL39P62891 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPL39P62891 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RPL39P62891 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RPL39P62891 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
RPL39P62891 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RPL39P62891 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RPL39P62891 LINC00561-201ENST00000565815 2738 ntBASIC2.84□□□□□ -1.96
RPL39P62891 AC099654.3-201ENST00000447087 1546 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC025031.4-201ENST00000621248 3271 ntBASIC2.83□□□□□ -1.96
RPL39P62891 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 AL158163.1-201ENST00000603915 1649 ntBASIC2.83□□□□□ -1.96
RPL39P62891 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RPL39P62891 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 RNA5SP435-201ENST00000364044 108 ntBASIC2.83□□□□□ -1.96
RPL39P62891 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.83□□□□□ -1.96
RPL39P62891 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RPL39P62891 MIR1251-201ENST00000408552 70 ntBASIC2.83□□□□□ -1.96
RPL39P62891 RPEP3-201ENST00000425462 676 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC006011.1-201ENST00000442758 349 ntBASIC2.83□□□□□ -1.96
RPL39P62891 HIGD1AP8-201ENST00000453927 274 ntBASIC2.83□□□□□ -1.96
RPL39P62891 RPL7P32-201ENST00000457119 744 ntBASIC2.83□□□□□ -1.96
RPL39P62891 EIF4A2P4-201ENST00000458691 1196 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC010307.1-201ENST00000467206 836 ntBASIC2.83□□□□□ -1.96
RPL39P62891 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 AC004069.2-201ENST00000505438 1114 ntBASIC2.83□□□□□ -1.96
RPL39P62891 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.83□□□□□ -1.96
RPL39P62891 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.83□□□□□ -1.96
RPL39P62891 IGKV1-32-201ENST00000519290 311 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AP001804.2-201ENST00000533932 910 ntBASIC2.83□□□□□ -1.96
RPL39P62891 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.83□□□□□ -1.96
RPL39P62891 APPL2-203ENST00000546731 684 ntTSL 2 BASIC2.83□□□□□ -1.96
RPL39P62891 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.83□□□□□ -1.96
RPL39P62891 PCNPP1-201ENST00000552501 511 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC022968.1-201ENST00000567372 442 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC099489.2-201ENST00000574976 260 ntBASIC2.83□□□□□ -1.96
RPL39P62891 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC2.83□□□□□ -1.96
RPL39P62891 AC133644.2-201ENST00000608142 540 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC090510.2-201ENST00000617465 629 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AC068870.2-201ENST00000620635 389 ntBASIC2.83□□□□□ -1.96
RPL39P62891 AP003497.2-201ENST00000624220 967 ntBASIC2.83□□□□□ -1.96
RPL39P62891 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
RPL39P62891 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
RPL39P62891 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC2.83□□□□□ -1.96
RPL39P62891 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RPL39P62891 MTCO1P46-201ENST00000451639 1491 ntBASIC2.83□□□□□ -1.96
RPL39P62891 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.83□□□□□ -1.96
RPL39P62891 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPL39P62891 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RPL39P62891 AC116667.1-201ENST00000604855 2072 ntBASIC2.82□□□□□ -1.96
RPL39P62891 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPL39P62891 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms