Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LARP1BP3-201ENST00000437229 869 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 NDUFS5P5-201ENST00000437256 321 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC110602.1-201ENST00000437414 318 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 RPS23P2-201ENST00000463671 415 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC104763.1-201ENST00000475274 360 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC025458.1-201ENST00000506046 166 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 DUXAP2-201ENST00000519198 589 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC092709.1-201ENST00000521355 1045 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.14□□□□□ -1.59
CLRN1P58418 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 MIR4420-201ENST00000583944 77 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.14□□□□□ -1.59
CLRN1P58418 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC068276.1-201ENST00000605793 379 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 NANOGP3-201ENST00000605855 286 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC024560.3-201ENST00000608482 349 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC025048.6-202ENST00000627667 438 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC000095.2-202ENST00000637415 154 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC119744.1-201ENST00000454746 1715 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 CAP1P2-201ENST00000417455 1409 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 MSL3P1-202ENST00000440028 1468 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 VPS35P1-201ENST00000563400 1518 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 AC011933.2-201ENST00000578539 2790 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 ASNSP1-204ENST00000641977 1664 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 SUGT1P1-201ENST00000379514 476 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 SNORA75-201ENST00000384158 137 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 SNORD116-23-201ENST00000384645 92 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 HMGB3P7-201ENST00000400214 611 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 VN1R12P-201ENST00000403778 876 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 AL512430.2-201ENST00000406786 339 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 MIR1284-201ENST00000408337 120 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 AK4P4-201ENST00000419465 646 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 USP9YP35-201ENST00000435696 412 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 AC241584.1-201ENST00000438469 1241 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 Z83838.1-202ENST00000456225 839 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 RPL23AP71-201ENST00000470966 469 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 RPL7P41-201ENST00000485823 957 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC006499.4-201ENST00000510947 694 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 RPL7L1P13-201ENST00000511702 739 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 Y_RNA.667-201ENST00000516212 107 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 RNY4P37-201ENST00000516225 96 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 RNA5SP438-201ENST00000516561 112 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 RNU6-405P-201ENST00000516637 110 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 RN7SKP283-201ENST00000517197 270 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 MTND4LP26-201ENST00000518144 282 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 OR5G4P-201ENST00000525251 760 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLRN1P58418 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLRN1P58418 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 GTF2IP22-201ENST00000554443 182 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.13□□□□□ -1.59
CLRN1P58418 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC008498.1-201ENST00000613012 531 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms