Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.86□□□□□ -1.63
ACLYP53396 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ACLYP53396 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ACLYP53396 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
ACLYP53396 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.86□□□□□ -1.63
ACLYP53396 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.86□□□□□ -1.63
ACLYP53396 AC015912.2-201ENST00000571053 181 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-368P-201ENST00000620928 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-538P-201ENST00000622329 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ACLYP53396 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ACLYP53396 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
ACLYP53396 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.85□□□□□ -1.63
ACLYP53396 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 RNA5SP130-201ENST00000364431 114 ntBASIC4.85□□□□□ -1.63
ACLYP53396 RNU6-729P-201ENST00000384399 107 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AL590806.1-201ENST00000415818 853 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AC106901.1-201ENST00000425086 698 ntBASIC4.85□□□□□ -1.63
ACLYP53396 COX6B1P7-201ENST00000430845 235 ntBASIC4.85□□□□□ -1.63
ACLYP53396 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.85□□□□□ -1.63
ACLYP53396 RRM2P4-201ENST00000441721 562 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AL512326.1-201ENST00000443050 721 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.85□□□□□ -1.63
ACLYP53396 AL358232.1-201ENST00000448030 501 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.85□□□□□ -1.63
ACLYP53396 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.85□□□□□ -1.63
ACLYP53396 ATP1B1P1-201ENST00000509767 915 ntBASIC4.85□□□□□ -1.63
ACLYP53396 KCTD9P2-201ENST00000512203 1013 ntBASIC4.85□□□□□ -1.63
ACLYP53396 RNA5SP519-201ENST00000516480 119 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.85□□□□□ -1.63
ACLYP53396 AC053481.4-201ENST00000583164 216 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.85□□□□□ -1.63
ACLYP53396 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.85□□□□□ -1.63
ACLYP53396 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 AC123912.3-201ENST00000600907 1367 ntBASIC4.85□□□□□ -1.63
ACLYP53396 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.85□□□□□ -1.63
ACLYP53396 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ACLYP53396 LINC01355-201ENST00000566551 5444 ntBASIC4.85□□□□□ -1.63
ACLYP53396 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACLYP53396 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ACLYP53396 AP001642.1-201ENST00000624727 2117 ntBASIC4.84□□□□□ -1.63
ACLYP53396 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ACLYP53396 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.63
ACLYP53396 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AC000374.1-201ENST00000434698 1745 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RLIMP1-201ENST00000339626 1680 ntBASIC4.84□□□□□ -1.63
ACLYP53396 VPS35P1-201ENST00000563400 1518 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ACLYP53396 RNU1-14P-201ENST00000362759 152 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RNU6-1263P-201ENST00000384601 106 ntBASIC4.84□□□□□ -1.63
ACLYP53396 PTMAP2-201ENST00000397627 327 ntBASIC4.84□□□□□ -1.63
ACLYP53396 FCF1P5-201ENST00000406490 482 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RNA5SP36-201ENST00000410197 133 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RNA5SP44-201ENST00000410446 133 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RN7SKP235-201ENST00000410662 305 ntBASIC4.84□□□□□ -1.63
ACLYP53396 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 CYP4F29P-201ENST00000420685 446 ntBASIC4.84□□□□□ -1.63
ACLYP53396 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ACLYP53396 AL157831.1-201ENST00000426134 473 ntBASIC4.84□□□□□ -1.63
ACLYP53396 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ACLYP53396 UBE2V1P3-201ENST00000439651 417 ntBASIC4.84□□□□□ -1.63
ACLYP53396 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 GTF3AP5-201ENST00000442645 697 ntBASIC4.84□□□□□ -1.63
ACLYP53396 MRPL48P1-201ENST00000445390 636 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 MTND6P32-201ENST00000457611 483 ntBASIC4.84□□□□□ -1.63
ACLYP53396 VN1R105P-201ENST00000486595 910 ntBASIC4.84□□□□□ -1.63
ACLYP53396 TPT1P3-201ENST00000492841 512 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 AC099522.1-202ENST00000514718 367 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 AC022616.2-201ENST00000523185 300 ntBASIC4.84□□□□□ -1.63
ACLYP53396 OR5BC1P-201ENST00000529327 739 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms