Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PHBP16-201ENST00000446318 950 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 C1DP3-201ENST00000455013 423 ntBASIC4.72□□□□□ -1.65
CASP4P49662 RPL31P53-201ENST00000457065 348 ntBASIC4.72□□□□□ -1.65
CASP4P49662 PSMC1P13-201ENST00000458195 985 ntBASIC4.72□□□□□ -1.65
CASP4P49662 RPL23AP24-201ENST00000458203 385 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 RN7SL98P-201ENST00000462271 300 ntBASIC4.72□□□□□ -1.65
CASP4P49662 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 RN7SL812P-201ENST00000493791 279 ntBASIC4.72□□□□□ -1.65
CASP4P49662 ARL4AP1-201ENST00000503220 705 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 AC008676.3-201ENST00000521237 435 ntBASIC4.72□□□□□ -1.65
CASP4P49662 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 AC113403.1-201ENST00000604910 193 ntBASIC4.72□□□□□ -1.65
CASP4P49662 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 AC107905.1-201ENST00000616204 426 ntBASIC4.72□□□□□ -1.65
CASP4P49662 uc_338.13-201ENST00000618243 179 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 AL035461.2-201ENST00000619201 524 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 AC019278.1-201ENST00000623516 479 ntBASIC4.72□□□□□ -1.65
CASP4P49662 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.72□□□□□ -1.65
CASP4P49662 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.72□□□□□ -1.65
CASP4P49662 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 Z95327.2-201ENST00000414579 1873 ntBASIC4.72□□□□□ -1.65
CASP4P49662 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 AC093535.2-201ENST00000624769 2326 ntBASIC4.72□□□□□ -1.65
CASP4P49662 VPS35P1-201ENST00000563400 1518 ntBASIC4.72□□□□□ -1.65
CASP4P49662 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.71□□□□□ -1.66
CASP4P49662 AC105074.1-201ENST00000623380 3095 ntBASIC4.71□□□□□ -1.66
CASP4P49662 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 AC126755.2-208ENST00000327792 462 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AC138969.1-213ENST00000331436 462 ntBASIC4.71□□□□□ -1.66
CASP4P49662 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.71□□□□□ -1.66
CASP4P49662 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CASP4P49662 RPS4XP9-201ENST00000405151 780 ntBASIC4.71□□□□□ -1.66
CASP4P49662 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.71□□□□□ -1.66
CASP4P49662 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 AC009480.2-201ENST00000422916 432 ntBASIC4.71□□□□□ -1.66
CASP4P49662 MAPRE1P3-201ENST00000435438 796 ntBASIC4.71□□□□□ -1.66
CASP4P49662 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.71□□□□□ -1.66
CASP4P49662 AC011276.1-201ENST00000469688 323 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AF186190.1-201ENST00000517470 480 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.71□□□□□ -1.66
CASP4P49662 AC018442.3-201ENST00000523025 183 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.71□□□□□ -1.66
CASP4P49662 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.71□□□□□ -1.66
CASP4P49662 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.71□□□□□ -1.66
CASP4P49662 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.71□□□□□ -1.66
CASP4P49662 MIR4277-201ENST00000578298 84 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.71□□□□□ -1.66
CASP4P49662 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
CASP4P49662 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AC015722.2-201ENST00000622210 551 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AL445363.3-201ENST00000623080 671 ntBASIC4.71□□□□□ -1.66
CASP4P49662 AP002967.1-201ENST00000624203 539 ntBASIC4.71□□□□□ -1.66
CASP4P49662 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
CASP4P49662 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CASP4P49662 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASP4P49662 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CASP4P49662 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CASP4P49662 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CASP4P49662 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.7□□□□□ -1.66
CASP4P49662 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 FAM3C2-201ENST00000312214 681 ntBASIC4.7□□□□□ -1.66
CASP4P49662 RNA5SP175-201ENST00000364275 119 ntBASIC4.7□□□□□ -1.66
CASP4P49662 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CASP4P49662 AL807761.1-201ENST00000417622 171 ntBASIC4.7□□□□□ -1.66
CASP4P49662 MFSD13B-201ENST00000420133 1290 ntBASIC4.7□□□□□ -1.66
CASP4P49662 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.7□□□□□ -1.66
CASP4P49662 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.7□□□□□ -1.66
CASP4P49662 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
CASP4P49662 RPS3AP54-201ENST00000435535 734 ntBASIC4.7□□□□□ -1.66
CASP4P49662 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.7□□□□□ -1.66
CASP4P49662 TXNP2-201ENST00000443918 295 ntBASIC4.7□□□□□ -1.66
CASP4P49662 AC006463.2-201ENST00000473326 348 ntBASIC4.7□□□□□ -1.66
CASP4P49662 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CASP4P49662 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.7□□□□□ -1.66
CASP4P49662 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.7□□□□□ -1.66
CASP4P49662 PHBP17-201ENST00000528576 541 ntBASIC4.7□□□□□ -1.66
CASP4P49662 AL109766.1-201ENST00000555080 552 ntBASIC4.7□□□□□ -1.66
CASP4P49662 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.7□□□□□ -1.66
CASP4P49662 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms