Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC020634.1-201ENST00000608701 549 ntBASIC4.5□□□□□ -1.69
FDFT1P37268 AC092159.4-201ENST00000624944 550 ntBASIC4.5□□□□□ -1.69
FDFT1P37268 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.5□□□□□ -1.69
FDFT1P37268 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.5□□□□□ -1.69
FDFT1P37268 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FDFT1P37268 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FDFT1P37268 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.5□□□□□ -1.69
FDFT1P37268 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FDFT1P37268 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.5□□□□□ -1.69
FDFT1P37268 ASNSP1-201ENST00000518311 1939 ntBASIC4.5□□□□□ -1.69
FDFT1P37268 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
FDFT1P37268 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
FDFT1P37268 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
FDFT1P37268 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 OR52B1P-201ENST00000316506 909 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 RHOT1P2-201ENST00000366423 333 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 MIR550A3-201ENST00000390735 95 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AL034374.1-201ENST00000406329 351 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 MIR1911-201ENST00000410783 80 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 RNA5SP104-201ENST00000410989 118 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 CASKP1-201ENST00000412870 582 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AC073136.2-201ENST00000417282 849 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.49□□□□□ -1.69
FDFT1P37268 AL360081.1-201ENST00000428299 555 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 USP9YP9-201ENST00000429406 715 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 GEMIN8P3-201ENST00000445417 720 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AC105233.1-201ENST00000498840 781 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 AC117525.1-201ENST00000515228 503 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.49□□□□□ -1.69
FDFT1P37268 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 AC005034.4-201ENST00000603612 899 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AC091953.3-201ENST00000623220 236 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 AL049536.1-201ENST00000625043 744 ntBASIC4.49□□□□□ -1.69
FDFT1P37268 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
FDFT1P37268 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
FDFT1P37268 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
FDFT1P37268 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
FDFT1P37268 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FDFT1P37268 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
FDFT1P37268 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FDFT1P37268 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
FDFT1P37268 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.48□□□□□ -1.69
FDFT1P37268 OR4K15-201ENST00000305051 1216 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 MIR3065-201ENST00000390137 79 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 UQCRBP1-201ENST00000421129 336 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.48□□□□□ -1.69
FDFT1P37268 AL590762.4-201ENST00000425885 253 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC006455.6-201ENST00000426192 893 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 PRELID3BP10-201ENST00000431957 584 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 RPEP2-201ENST00000432149 701 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 NDUFA5P1-201ENST00000433858 341 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AL132765.1-201ENST00000434165 553 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 CACYBPP1-201ENST00000438592 684 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 ELOCP10-201ENST00000440624 327 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 HMGB3P9-201ENST00000441799 583 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 RPL31P20-201ENST00000449593 360 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 AC093270.2-201ENST00000486157 792 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC025445.1-201ENST00000502728 300 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.48□□□□□ -1.69
FDFT1P37268 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.48□□□□□ -1.69
FDFT1P37268 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.48□□□□□ -1.69
FDFT1P37268 AC009303.3-201ENST00000591103 736 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AP001160.4-201ENST00000596971 382 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC068790.7-201ENST00000602347 528 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 ELOCP34-201ENST00000604436 327 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC100847.1-201ENST00000611316 481 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AL133370.2-201ENST00000619934 439 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AP005019.3-201ENST00000620418 560 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 AC019278.1-201ENST00000623516 479 ntBASIC4.48□□□□□ -1.69
FDFT1P37268 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FDFT1P37268 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
FDFT1P37268 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
FDFT1P37268 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
FDFT1P37268 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
FDFT1P37268 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
FDFT1P37268 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FDFT1P37268 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms