Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA3P32297 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CHRNA3P32297 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA3P32297 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA3P32297 RNU1-108P-201ENST00000362556 161 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RNU1-94P-201ENST00000362627 173 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RNU6-666P-201ENST00000363499 107 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RNA5SP151-201ENST00000365632 117 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AL512430.2-201ENST00000406786 339 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RN7SKP106-201ENST00000410832 272 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AL591848.1-201ENST00000413092 322 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.81□□□□□ -1.64
CHRNA3P32297 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA3P32297 AP002345.1-201ENST00000456493 928 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AC006463.2-201ENST00000473326 348 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RPL12P20-201ENST00000475538 479 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA3P32297 HMGB1P47-201ENST00000511281 589 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 RNU6-751P-201ENST00000516382 101 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 OR5M2P-201ENST00000529003 936 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AC023762.1-201ENST00000603280 584 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 AC116447.1-201ENST00000613153 453 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA3P32297 AP000346.3-201ENST00000622821 210 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 OR5AC4P-202ENST00000642086 985 ntBASIC4.81□□□□□ -1.64
CHRNA3P32297 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA3P32297 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA3P32297 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA3P32297 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA3P32297 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 A2MP1-204ENST00000566278 4130 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 CYCSP10-201ENST00000417973 294 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC048351.1-201ENST00000420064 602 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC092570.3-201ENST00000420113 693 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 EIF4EP1-201ENST00000422311 642 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 NDUFA5P10-201ENST00000432147 357 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC245517.2-201ENST00000442890 346 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC023512.1-201ENST00000444513 499 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 H2AFZP5-201ENST00000446960 382 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 NDUFA12P1-201ENST00000455914 406 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 RNU6-1218P-201ENST00000458990 108 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA3P32297 RN7SL354P-201ENST00000469282 294 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC090013.1-201ENST00000485147 480 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC098799.3-201ENST00000506095 438 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC018552.3-201ENST00000567416 561 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRNA3P32297 RN7SL652P-201ENST00000577769 300 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 RN7SL690P-201ENST00000582087 240 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC010200.2-201ENST00000605098 235 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA3P32297 MIR7154-201ENST00000620673 73 ntBASIC4.8□□□□□ -1.64
CHRNA3P32297 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA3P32297 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRNA3P32297 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA3P32297 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA3P32297 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA3P32297 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA3P32297 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA3P32297 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA3P32297 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.79□□□□□ -1.64
CHRNA3P32297 AC104118.1-201ENST00000607625 1589 ntBASIC4.79□□□□□ -1.64
CHRNA3P32297 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA3P32297 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms