Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN6P29350 ZFRP1-201ENST00000457579 2970 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 AL592182.3-201ENST00000642132 3304 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PTPN6P29350 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
PTPN6P29350 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN6P29350 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN6P29350 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
PTPN6P29350 AC009501.3-201ENST00000605001 1352 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN6P29350 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 OR52B1P-201ENST00000316506 909 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 RNA5SP151-201ENST00000365632 117 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 RNU6-40P-201ENST00000384254 107 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AL035419.1-201ENST00000397037 564 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 AC004448.2-201ENST00000422360 586 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 SEC63P1-201ENST00000425785 1258 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 DPY19L1P2-201ENST00000426647 915 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPN6P29350 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPN6P29350 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN6P29350 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
PTPN6P29350 AURKAPS2-201ENST00000454983 333 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 RPL5P30-201ENST00000465511 891 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN6P29350 OR52A4P-202ENST00000481634 799 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 OR9N1P-202ENST00000494289 481 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC021146.3-201ENST00000511911 260 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC090819.1-201ENST00000523800 1111 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTPN6P29350 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN6P29350 RPL21P7-201ENST00000557463 483 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC105129.1-201ENST00000560250 297 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPN6P29350 VN1R84P-201ENST00000593697 235 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPN6P29350 AC012557.1-201ENST00000607115 611 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 AC100847.1-201ENST00000611316 481 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 CR589904.2-201ENST00000612533 440 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
PTPN6P29350 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN6P29350 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN6P29350 SDAD1P1-202ENST00000524156 2051 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN6P29350 AP001002.1-201ENST00000625148 1513 ntBASIC4.45□□□□□ -1.7
PTPN6P29350 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTPN6P29350 AC091046.3-201ENST00000631455 1574 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN6P29350 HSPD1P14-201ENST00000432666 1618 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN6P29350 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 Z86062.1-201ENST00000406773 777 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 RNA5SP113-201ENST00000410486 84 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AC013404.1-201ENST00000413068 249 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 FAM204CP-201ENST00000424489 642 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 RPL21P43-201ENST00000425440 472 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AL049745.1-201ENST00000433953 286 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN6P29350 PPIAP13-201ENST00000434706 478 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 ARL4AP3-201ENST00000441452 574 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC092691.2-201ENST00000461787 803 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 ATP5J2P6-201ENST00000565203 266 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN6P29350 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN6P29350 RPL7P50-201ENST00000600588 727 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms