Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
POLR2AP24928 MIR208A-201ENST00000362287 71 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 OR1L6-202ENST00000373684 1044 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 RNU6-648P-201ENST00000410190 107 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 Y_RNA.599-201ENST00000410489 109 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.63□□□□□ -1.51
POLR2AP24928 KRR1P1-201ENST00000419430 803 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 MTCO1P43-201ENST00000431831 488 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.63□□□□□ -1.51
POLR2AP24928 RPS17P8-201ENST00000434525 335 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 Z95327.1-201ENST00000446082 482 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 AC034244.1-201ENST00000507687 207 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 MTCYBP37-201ENST00000510642 1133 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 RNU6-276P-201ENST00000516114 96 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC021733.2-201ENST00000518830 497 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.63□□□□□ -1.51
POLR2AP24928 OR4A6P-201ENST00000534364 970 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 TRAV8-5-201ENST00000537369 341 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.63□□□□□ -1.51
POLR2AP24928 AC093227.2-201ENST00000589357 285 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 AL023881.1-201ENST00000621088 301 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.63□□□□□ -1.51
POLR2AP24928 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.63□□□□□ -1.51
POLR2AP24928 AC098679.5-201ENST00000624394 571 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.63□□□□□ -1.51
POLR2AP24928 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.63□□□□□ -1.51
POLR2AP24928 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 SMG1P6-201ENST00000532337 2930 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
POLR2AP24928 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.63□□□□□ -1.51
POLR2AP24928 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 SGO1P1-201ENST00000603525 1447 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.62□□□□□ -1.51
POLR2AP24928 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 AL513175.2-201ENST00000422071 443 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 ACTR3P2-201ENST00000439585 1257 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
POLR2AP24928 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.62□□□□□ -1.51
POLR2AP24928 DUXAP6-201ENST00000553858 601 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 OR7M1P-201ENST00000608946 533 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AL096803.3-201ENST00000609032 532 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 AP000756.2-201ENST00000624168 2567 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AC010168.2-201ENST00000562691 5428 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
POLR2AP24928 MIR383-201ENST00000362257 73 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 MIR365B-201ENST00000362317 111 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 MIR659-201ENST00000384963 97 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RNA5SP317-201ENST00000410176 116 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RNA5SP311-201ENST00000411290 116 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AC016907.1-201ENST00000419483 435 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 MTND4P6-201ENST00000438297 472 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 ELOCP30-201ENST00000447108 299 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 AP002812.1-201ENST00000495378 474 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 MTCO2P32-201ENST00000514865 403 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RN7SKP248-201ENST00000516278 305 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RNA5SP315-201ENST00000516340 116 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RNA5SP312-201ENST00000517068 116 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 RNU1-45P-201ENST00000517191 141 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 MRPL49P2-201ENST00000521066 465 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 OR4V1P-201ENST00000525394 1140 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AP003717.3-201ENST00000544832 1180 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.62□□□□□ -1.51
POLR2AP24928 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms