Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 AC008083.2-201ENST00000546707 476 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AL121579.2-201ENST00000555466 590 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC020661.2-201ENST00000560114 134 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 MIR544B-201ENST00000582372 78 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC090312.2-201ENST00000582687 378 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 HMGN1P30-201ENST00000589286 268 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.59□□□□□ -1.35
NFKB1P19838 AC091193.1-201ENST00000604640 448 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.59□□□□□ -1.35
NFKB1P19838 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NFKB1P19838 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.59□□□□□ -1.36
NFKB1P19838 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NFKB1P19838 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NFKB1P19838 Y_RNA.132-201ENST00000363421 102 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 RNU4-7P-201ENST00000364758 141 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 SNORD115.1-201ENST00000391109 76 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC245036.1-201ENST00000391727 309 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 ARSFP1-201ENST00000398758 477 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 MIR1266-201ENST00000408125 84 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.58□□□□□ -1.36
NFKB1P19838 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.58□□□□□ -1.36
NFKB1P19838 RPL31P35-201ENST00000431058 377 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 SEPT14P3-201ENST00000439401 183 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 TXNP5-201ENST00000441043 315 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 RPL23AP16-201ENST00000441715 421 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 COL11A2P1-205ENST00000441798 676 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AL732372.2-207ENST00000445840 183 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 SEPT14P2-201ENST00000453405 183 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 MEMO1P3-201ENST00000459811 302 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 RN7SL83P-201ENST00000468131 297 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC021205.1-201ENST00000468797 348 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC096741.1-201ENST00000472250 846 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 AC106872.3-201ENST00000495104 446 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.58□□□□□ -1.36
NFKB1P19838 AL035404.1-201ENST00000497982 568 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 SEPT14P4-201ENST00000513445 186 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.58□□□□□ -1.36
NFKB1P19838 FO082796.1-201ENST00000523795 183 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC073916.1-201ENST00000545095 130 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.58□□□□□ -1.36
NFKB1P19838 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 AC027796.1-201ENST00000575593 512 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.58□□□□□ -1.36
NFKB1P19838 AC243960.4-201ENST00000600532 288 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC004805.3-201ENST00000603178 310 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AL133338.2-201ENST00000604292 736 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AL359999.1-201ENST00000604513 294 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC019257.2-201ENST00000605539 497 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 AL355974.3-201ENST00000617383 467 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 AL132640.3-201ENST00000630473 177 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AC026634.1-201ENST00000634369 198 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 MTCO1P9-201ENST00000505577 1534 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NFKB1P19838 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 AC024560.2-201ENST00000507981 1497 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 AC022034.1-201ENST00000512867 2156 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
NFKB1P19838 DOCK11P1-201ENST00000553480 5932 ntBASIC6.58□□□□□ -1.36
NFKB1P19838 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms