Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC138907.10-201ENST00000623708 983 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 AL133243.3-201ENST00000617415 3004 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
FREM3P0C091 AL078595.2-201ENST00000605309 1780 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FREM3P0C091 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 RN7SKP182-201ENST00000410772 298 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.82□□□□□ -1.8
FREM3P0C091 PDSS1P1-201ENST00000422953 1114 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 AC079804.1-201ENST00000461922 436 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 RPL5P30-201ENST00000465511 891 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 ASNSP4-201ENST00000511103 447 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 AC108064.1-201ENST00000513791 460 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.82□□□□□ -1.8
FREM3P0C091 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.82□□□□□ -1.8
FREM3P0C091 RN7SL703P-201ENST00000578485 302 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.82□□□□□ -1.8
FREM3P0C091 AP000357.1-201ENST00000409926 1165 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 OR13Z1P-201ENST00000416141 834 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.82□□□□□ -1.8
FREM3P0C091 RN7SL600P-201ENST00000581811 299 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
FREM3P0C091 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.82□□□□□ -1.8
FREM3P0C091 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FREM3P0C091 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
FREM3P0C091 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
FREM3P0C091 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
FREM3P0C091 AC105074.1-201ENST00000623380 3095 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 MT-RNR1-201ENST00000389680 954 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 SNORD66.1-201ENST00000391230 76 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 RPL17P36-201ENST00000420302 549 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.81□□□□□ -1.8
FREM3P0C091 RPL23AP25-201ENST00000430973 463 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.81□□□□□ -1.8
FREM3P0C091 CEACAMP1-201ENST00000434624 1035 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 RPL23AP46-201ENST00000438548 490 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.81□□□□□ -1.8
FREM3P0C091 AC108022.1-201ENST00000493466 478 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 RNU1-45P-201ENST00000517191 141 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.81□□□□□ -1.8
FREM3P0C091 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 AC008638.3-201ENST00000603341 463 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 AC079587.1-201ENST00000603846 277 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 AC025175.1-201ENST00000606482 759 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 FAM27D1-201ENST00000612308 341 ntBASIC3.81□□□□□ -1.8
FREM3P0C091 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FREM3P0C091 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
FREM3P0C091 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 AC021242.1-201ENST00000507315 2035 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 RNU1-15P-201ENST00000353977 144 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 RNA5SP52-201ENST00000362448 134 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 NPM1P38-201ENST00000403835 865 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 NACAP7-201ENST00000407371 609 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 HSFY6P-201ENST00000445573 403 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 RPS4XP15-201ENST00000489210 795 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.8□□□□□ -1.8
FREM3P0C091 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
FREM3P0C091 MTND6P33-201ENST00000571794 183 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms