Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.37□□□□□ -1.39
PDGFAP04085 AP001025.2-201ENST00000490908 477 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AC090453.1-201ENST00000495560 436 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.37□□□□□ -1.39
PDGFAP04085 MTND6P2-201ENST00000512226 524 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AP005597.2-201ENST00000526238 341 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC018638.8-201ENST00000588755 281 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC008966.2-201ENST00000606157 453 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 BX664608.1-201ENST00000610519 487 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 RMST_3.1-201ENST00000611651 109 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC005899.7-201ENST00000618199 588 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL158801.5-201ENST00000623123 465 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 CR392039.4-201ENST00000624968 501 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC111152.1-202ENST00000635848 339 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 MFSD8-219ENST00000641228 2559 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC110597.1-201ENST00000562669 3176 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 AC007993.1-201ENST00000621298 2430 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC007159.1-201ENST00000566529 4706 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PDGFAP04085 RNA5SP122-201ENST00000384457 108 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 RNU6-456P-201ENST00000384493 107 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 OR9R1P-201ENST00000412200 877 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 RANP6-201ENST00000413691 644 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 BTF3L4P3-201ENST00000418879 476 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 RPS10P21-201ENST00000430654 475 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AL389925.1-201ENST00000432257 728 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 FAM103A2P-201ENST00000444122 354 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 RPL36AP15-201ENST00000444514 266 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 MTND4P19-201ENST00000446659 478 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 PABPC1P3-201ENST00000469174 459 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 AC139783.2-201ENST00000504847 1145 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC011352.2-201ENST00000514574 1016 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC011853.1-201ENST00000518911 454 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 PHBP17-201ENST00000528576 541 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms