Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFP01375 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.16□□□□□ -1.74
TNFP01375 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TNFP01375 RNA5SP22-201ENST00000365393 109 ntBASIC4.16□□□□□ -1.74
TNFP01375 SNORD66.1-201ENST00000391230 76 ntBASIC4.16□□□□□ -1.74
TNFP01375 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 AL356968.2-201ENST00000412769 1257 ntBASIC4.16□□□□□ -1.74
TNFP01375 CEACAMP8-201ENST00000413902 580 ntBASIC4.16□□□□□ -1.74
TNFP01375 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.16□□□□□ -1.74
TNFP01375 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
TNFP01375 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFP01375 AC026402.1-201ENST00000513642 170 ntBASIC4.16□□□□□ -1.74
TNFP01375 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFP01375 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
TNFP01375 AP000859.1-201ENST00000525536 307 ntBASIC4.16□□□□□ -1.74
TNFP01375 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.16□□□□□ -1.74
TNFP01375 OR8R1P-201ENST00000543943 764 ntBASIC4.16□□□□□ -1.74
TNFP01375 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.16□□□□□ -1.74
TNFP01375 AC005034.4-201ENST00000603612 899 ntBASIC4.16□□□□□ -1.74
TNFP01375 AC090948.2-201ENST00000607363 564 ntBASIC4.16□□□□□ -1.74
TNFP01375 AC010608.2-201ENST00000624830 470 ntBASIC4.16□□□□□ -1.74
TNFP01375 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
TNFP01375 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TNFP01375 Z82217.1-201ENST00000625157 8149 ntBASIC4.16□□□□□ -1.74
TNFP01375 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.16□□□□□ -1.74
TNFP01375 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
TNFP01375 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFP01375 AC099654.3-201ENST00000447087 1546 ntBASIC4.16□□□□□ -1.74
TNFP01375 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.15□□□□□ -1.74
TNFP01375 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
TNFP01375 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TNFP01375 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFP01375 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFP01375 Y_RNA.126-201ENST00000363382 111 ntBASIC4.15□□□□□ -1.75
TNFP01375 RN7SKP33-201ENST00000410942 340 ntBASIC4.15□□□□□ -1.75
TNFP01375 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFP01375 AL356095.1-201ENST00000417217 199 ntBASIC4.15□□□□□ -1.75
TNFP01375 AL161631.1-201ENST00000417933 486 ntBASIC4.15□□□□□ -1.75
TNFP01375 UBTFL3-201ENST00000418934 1024 ntBASIC4.15□□□□□ -1.75
TNFP01375 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 RBMY1KP-201ENST00000423480 476 ntBASIC4.15□□□□□ -1.75
TNFP01375 YY1P1-201ENST00000427625 668 ntBASIC4.15□□□□□ -1.75
TNFP01375 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 AC092447.2-201ENST00000435487 669 ntBASIC4.15□□□□□ -1.75
TNFP01375 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNFP01375 AP000942.1-201ENST00000463969 747 ntBASIC4.15□□□□□ -1.75
TNFP01375 UBTFL6-201ENST00000477929 1024 ntBASIC4.15□□□□□ -1.75
TNFP01375 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 BTG4P1-201ENST00000510421 183 ntBASIC4.15□□□□□ -1.75
TNFP01375 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.15□□□□□ -1.75
TNFP01375 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFP01375 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.15□□□□□ -1.75
TNFP01375 AC008759.1-201ENST00000589783 983 ntBASIC4.15□□□□□ -1.75
TNFP01375 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.15□□□□□ -1.75
TNFP01375 RNU4-89P-201ENST00000607443 133 ntBASIC4.15□□□□□ -1.75
TNFP01375 AL138721.1-201ENST00000616756 179 ntBASIC4.15□□□□□ -1.75
TNFP01375 AC140113.4-201ENST00000622087 222 ntBASIC4.15□□□□□ -1.75
TNFP01375 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
TNFP01375 AC008013.2-202ENST00000637965 364 ntBASIC4.15□□□□□ -1.75
TNFP01375 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFP01375 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TNFP01375 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TNFP01375 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFP01375 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TNFP01375 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 ENSAP1-201ENST00000392855 326 ntBASIC4.14□□□□□ -1.75
TNFP01375 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFP01375 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.14□□□□□ -1.75
TNFP01375 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 AC006326.1-201ENST00000445465 787 ntBASIC4.14□□□□□ -1.75
TNFP01375 AF213884.1-201ENST00000488102 463 ntBASIC4.14□□□□□ -1.75
TNFP01375 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.14□□□□□ -1.75
TNFP01375 AC093824.1-201ENST00000508796 343 ntBASIC4.14□□□□□ -1.75
TNFP01375 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFP01375 PHBP17-201ENST00000528576 541 ntBASIC4.14□□□□□ -1.75
TNFP01375 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFP01375 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.14□□□□□ -1.75
TNFP01375 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 AC010547.7-201ENST00000570323 333 ntBASIC4.14□□□□□ -1.75
TNFP01375 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.14□□□□□ -1.75
TNFP01375 MIR6867-201ENST00000610636 67 ntBASIC4.14□□□□□ -1.75
TNFP01375 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 AC005086.4-201ENST00000623065 213 ntBASIC4.14□□□□□ -1.75
TNFP01375 AC019278.1-201ENST00000623516 479 ntBASIC4.14□□□□□ -1.75
TNFP01375 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.14□□□□□ -1.75
TNFP01375 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNFP01375 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms