Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC025031.4-201ENST00000621248 3271 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 MIR331-201ENST00000362302 94 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-1320P-201ENST00000390838 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-1269P-201ENST00000391139 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC106901.1-201ENST00000425086 698 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.06□□□□□ -1.76
UPK1AO00322 RPL12P28-201ENST00000430852 489 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.06□□□□□ -1.76
UPK1AO00322 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.06□□□□□ -1.76
UPK1AO00322 MTND2P28-201ENST00000457540 1044 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-599P-201ENST00000459383 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-1193P-201ENST00000459461 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.06□□□□□ -1.76
UPK1AO00322 AC017037.1-201ENST00000508460 471 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 IGLVIV-65-201ENST00000517313 360 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.06□□□□□ -1.76
UPK1AO00322 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.06□□□□□ -1.76
UPK1AO00322 AL121839.1-201ENST00000556233 1185 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.06□□□□□ -1.76
UPK1AO00322 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
UPK1AO00322 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC234771.5-201ENST00000600161 514 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.06□□□□□ -1.76
UPK1AO00322 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 uc_338.13-201ENST00000618243 179 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-368P-201ENST00000620928 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 RNU6-538P-201ENST00000622329 107 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.06□□□□□ -1.76
UPK1AO00322 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 AL356489.2-201ENST00000566968 3528 ntBASIC4.06□□□□□ -1.76
UPK1AO00322 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.06□□□□□ -1.76
UPK1AO00322 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
UPK1AO00322 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.05□□□□□ -1.76
UPK1AO00322 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.05□□□□□ -1.76
UPK1AO00322 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 MIR585-201ENST00000384887 94 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AL512430.2-201ENST00000406786 339 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 SNORA11F-201ENST00000408237 128 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 JKAMPP1-201ENST00000413804 919 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.05□□□□□ -1.76
UPK1AO00322 NFYAP1-201ENST00000431953 972 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AL132765.1-201ENST00000434165 553 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 NDUFA12P1-201ENST00000455914 406 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 RPS29P33-201ENST00000456717 146 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.05□□□□□ -1.76
UPK1AO00322 RPL7P22-201ENST00000466005 733 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 RPS27AP16-201ENST00000492222 470 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.05□□□□□ -1.76
UPK1AO00322 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.05□□□□□ -1.76
UPK1AO00322 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 EIF4EP5-201ENST00000528228 640 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.05□□□□□ -1.76
UPK1AO00322 AC068831.4-201ENST00000556118 109 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 AC113403.1-201ENST00000604910 193 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.05□□□□□ -1.76
UPK1AO00322 AL589935.2-201ENST00000616471 1231 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC007546.1-201ENST00000619452 559 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AP000346.3-201ENST00000622821 210 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 AC073342.3-201ENST00000624211 193 ntBASIC4.05□□□□□ -1.76
UPK1AO00322 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1AO00322 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
UPK1AO00322 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 AC073429.2-201ENST00000569694 1444 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UPK1AO00322 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
UPK1AO00322 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RNU6-1331P-201ENST00000363658 106 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RNA5SP175-201ENST00000364275 119 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RNU6-1263P-201ENST00000384601 106 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1AO00322 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1AO00322 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1AO00322 RAB9AP5-201ENST00000437794 597 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RAB9AP2-201ENST00000443911 597 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1AO00322 AC006517.1-201ENST00000480485 328 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RN7SL205P-201ENST00000490174 284 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1AO00322 HMGB3P13-201ENST00000511263 607 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms