Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL121657.1-201ENST00000327215 531 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 Y_RNA.11-201ENST00000362375 109 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RNA5SP514-201ENST00000363717 111 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RN7SKP78-201ENST00000364711 318 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RNU4-91P-201ENST00000364778 135 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 VN1R12P-201ENST00000403778 876 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 NCSTNP1-201ENST00000406229 144 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 BTF3P7-201ENST00000407097 488 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 TPMTP3-201ENST00000411928 735 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RPS4XP5-201ENST00000419038 768 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC104651.1-201ENST00000427559 735 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 VN1R54P-201ENST00000435210 1049 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL031663.1-201ENST00000437445 219 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ARL5AP2-201ENST00000444698 533 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RPL36AP33-201ENST00000450395 310 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RN7SL254P-201ENST00000460609 284 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 PRELID3BP4-201ENST00000515476 571 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RN7SKP35-201ENST00000517210 151 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP001207.1-201ENST00000524051 481 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP003033.2-201ENST00000528901 805 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 OR4A43P-201ENST00000532938 908 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL121579.1-201ENST00000555129 305 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC121758.1-202ENST00000556917 658 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ZNF519P2-201ENST00000557032 169 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 TXNP4-201ENST00000575018 310 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC060780.2-201ENST00000589047 198 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC119501.1-201ENST00000603646 475 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AP001330.5-201ENST00000607176 411 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC243654.2-201ENST00000612843 443 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC116447.1-201ENST00000613153 453 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL021918.2-201ENST00000613415 194 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC005840.5-201ENST00000619166 599 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 FAM27E2-201ENST00000619668 403 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL136228.1-201ENST00000622221 319 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AC087821.2-201ENST00000637086 450 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RBPJP7-201ENST00000442803 1447 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RBPJP5-201ENST00000449433 1447 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 RNF6P1-201ENST00000444889 1784 ntBASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CGB1A6NKQ9 AL118496.1-201ENST00000440201 1812 ntBASIC4.67□□□□□ -1.66
CGB1A6NKQ9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 GVINP1-202ENST00000531871 7271 ntBASIC4.67□□□□□ -1.66
CGB1A6NKQ9 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.67□□□□□ -1.66
CGB1A6NKQ9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CGB1A6NKQ9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms