Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 RNVU1-6-201ENST00000364688 164 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 RNU6-891P-201ENST00000384280 111 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 FCF1P5-201ENST00000406490 482 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AL590139.1-201ENST00000416267 400 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 MTND2P11-201ENST00000423638 648 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 CENPIP1-201ENST00000425713 902 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 SYT14P1-201ENST00000481459 721 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AF186190.1-201ENST00000517470 480 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AP000827.1-201ENST00000527814 258 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC091178.1-203ENST00000584586 279 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 ADAD1P2-201ENST00000588476 646 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 AL450326.2-201ENST00000421913 1962 ntBASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAPPC4Q9Y296 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC021146.4-201ENST00000309229 279 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 RNU6-670P-201ENST00000364312 104 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 RAD23BP1-201ENST00000421404 1227 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC073335.1-201ENST00000427776 363 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC073264.2-201ENST00000448886 166 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 SBDSP1-204ENST00000453858 737 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 RPL12P20-201ENST00000475538 479 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 IGLV2-34-201ENST00000490007 283 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AP006289.1-201ENST00000538089 277 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC079791.1-201ENST00000605356 973 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC116651.1-201ENST00000609724 556 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AL138721.1-201ENST00000616756 179 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC012618.3-205ENST00000637896 1496 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 AC016588.2-201ENST00000632484 3021 ntBASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAPPC4Q9Y296 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC103591.2-201ENST00000265259 766 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RNU1-15P-201ENST00000353977 144 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 MIR708-201ENST00000390708 88 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RPS3AP23-201ENST00000401762 784 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RPS16P5-201ENST00000406501 404 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AL512430.2-201ENST00000406786 339 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RAC1P3-201ENST00000416129 580 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC062016.2-201ENST00000420950 676 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms