Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP005229.2-201ENST00000609980 697 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 MAPK10-263ENST00000641052 4307 ntBASIC4.96□□□□□ -1.61
SIX4Q9UIU6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SIX4Q9UIU6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
SIX4Q9UIU6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 STX3-208ENST00000641815 3236 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL606537.1-201ENST00000607258 2011 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 GLULP6-201ENST00000399502 913 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 CEACAMP9-201ENST00000442990 513 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 RN7SL738P-201ENST00000470264 297 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC111000.3-201ENST00000508057 576 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC112518.2-201ENST00000508565 425 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AP003066.2-201ENST00000529375 555 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AP001781.1-201ENST00000530977 207 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC006116.5-201ENST00000591936 559 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 CLIC4P2-201ENST00000601934 717 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC008745.1-201ENST00000604064 271 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC084824.4-201ENST00000620106 731 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC138965.3-201ENST00000623875 498 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AL391684.1-202ENST00000641293 1636 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC093775.1-201ENST00000624154 1868 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SIX4Q9UIU6 AC003985.2-201ENST00000562268 1669 ntBASIC4.96□□□□□ -1.62
SIX4Q9UIU6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RNU6-729P-201ENST00000384399 107 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 BX664727.1-201ENST00000416024 466 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC006065.1-201ENST00000422539 802 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 MTCO2P23-201ENST00000425216 680 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RPL23AP1-201ENST00000428990 471 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 ISCUP1-201ENST00000454451 448 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC104982.1-201ENST00000478775 574 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RN7SL459P-201ENST00000481078 302 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms