Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AL359643.1-201ENST00000404109 423 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AL031584.1-201ENST00000447169 754 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 RPL7L1P8-201ENST00000469911 741 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 MTND4LP31-201ENST00000514859 294 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC069200.1-201ENST00000609511 323 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 AC015922.4-201ENST00000612568 690 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 MIR6075-201ENST00000620782 95 ntBASIC5.36□□□□□ -1.55
SCN11AQ9UI33 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 RNA5SP399-201ENST00000364003 117 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 RNU6ATAC-201ENST00000408749 126 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 RNU4-6P-201ENST00000410804 122 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 NPM1P21-201ENST00000513394 762 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 TRMT10BP1-201ENST00000519377 943 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AC009852.2-201ENST00000567898 485 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AC008739.3-201ENST00000603262 127 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AL121772.2-201ENST00000614331 297 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AC244100.1-202ENST00000621554 382 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AL356121.2-201ENST00000624715 780 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 AL929601.4-201ENST00000613011 1341 ntBASIC5.35□□□□□ -1.55
SCN11AQ9UI33 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN11AQ9UI33 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 RNA5SP372-201ENST00000390836 115 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 YME1L1P1-201ENST00000429435 297 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 IFITM8P-201ENST00000522529 394 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 OR5M7P-201ENST00000526140 972 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 PHBP17-201ENST00000528576 541 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 AC107982.3-201ENST00000584957 985 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 AC092162.3-201ENST00000624511 1624 ntBASIC5.34□□□□□ -1.55
SCN11AQ9UI33 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SCN11AQ9UI33 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 RNA5SP513-201ENST00000364648 118 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 U8.11-201ENST00000384699 133 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 U8.12-201ENST00000384701 133 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 RPL7P2-201ENST00000427639 268 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 U8.18-201ENST00000459285 133 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 RPL7P1-201ENST00000468161 747 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 RPL7P9-201ENST00000468715 747 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC022336.1-201ENST00000475510 337 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AL133372.1-201ENST00000493565 745 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC090312.1-201ENST00000580637 348 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 SLC25A36P1-201ENST00000590111 465 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC140113.4-201ENST00000622087 222 ntBASIC5.34□□□□□ -1.56
SCN11AQ9UI33 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN11AQ9UI33 AC106871.1-201ENST00000568324 3102 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 SKP1P3-201ENST00000429280 487 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms