Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC091905.2-201ENST00000623143 306 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 SNORA5A-201ENST00000384111 134 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 VDAC1P9-201ENST00000412766 841 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AL353748.1-201ENST00000440753 474 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 RPS11P1-201ENST00000451072 473 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AL591473.1-201ENST00000464297 313 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 RPL7P22-201ENST00000466005 733 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 RN7SL435P-201ENST00000584418 282 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AL592436.1-201ENST00000605135 558 ntBASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.62□□□□□ -1.51
PHRF1Q9P1Y6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 MIR1911-201ENST00000410783 80 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 EIF1P3-201ENST00000423841 334 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 RPS29P19-201ENST00000479709 171 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 AL352979.3-201ENST00000553515 247 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 AL357559.1-201ENST00000622228 274 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 AC016588.2-201ENST00000632484 3021 ntBASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.61□□□□□ -1.51
PHRF1Q9P1Y6 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 THAP12P5-201ENST00000405864 2275 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC000374.1-201ENST00000434698 1745 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AP000619.3-201ENST00000535634 1127 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC027455.1-201ENST00000574104 594 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC114878.2-201ENST00000604863 1251 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC233968.1-201ENST00000611212 1300 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC020978.9-201ENST00000624380 1141 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AL731532.2-201ENST00000623542 1953 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 VPS35P1-201ENST00000563400 1518 ntBASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.6□□□□□ -1.51
PHRF1Q9P1Y6 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 MIR483-201ENST00000385070 76 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 RN7SKP156-201ENST00000410308 342 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 CYCSP10-201ENST00000417973 294 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 AL050321.1-201ENST00000432363 400 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 ERCC6-202ENST00000374127 1782 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 AL133268.1-201ENST00000405676 1401 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 CASC19-204ENST00000641001 2055 ntBASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHRF1Q9P1Y6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC006011.1-201ENST00000442758 349 ntBASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 RPL23AP65-201ENST00000475608 468 ntBASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 HSPE1P5-201ENST00000561489 272 ntBASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC090312.1-201ENST00000580637 348 ntBASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 AC008966.2-201ENST00000606157 453 ntBASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms