Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 RPL32P3-201ENST00000359025 275 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AL607077.1-201ENST00000401718 499 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 GSTM3P2-201ENST00000412746 530 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 DYNLL1P7-201ENST00000429273 258 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 NUTF2P3-201ENST00000448540 384 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 RNA5SP246-201ENST00000458909 119 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 CEACAMP10-202ENST00000495431 496 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AP003730.1-201ENST00000524605 285 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC063950.1-201ENST00000552036 308 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC011477.5-201ENST00000586571 259 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AL122125.1-201ENST00000616999 600 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 MIR8059-201ENST00000620427 81 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC005261.4-201ENST00000600047 1385 ntBASIC4.47□□□□□ -1.69
CISHQ9NSE2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CISHQ9NSE2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CISHQ9NSE2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CISHQ9NSE2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 ST13P16-201ENST00000401760 781 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AL139039.2-201ENST00000407436 479 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 RPL23AP38-201ENST00000423801 469 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 HSPE1P16-201ENST00000426640 348 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 RPS23P7-201ENST00000466210 444 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC010618.1-201ENST00000469924 477 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC022655.2-201ENST00000577280 318 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC233702.9-201ENST00000581528 203 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC069366.1-201ENST00000583159 838 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 TMEM30CP-203ENST00000637814 1035 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CISHQ9NSE2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CISHQ9NSE2 AC092162.3-201ENST00000624511 1624 ntBASIC4.46□□□□□ -1.7
CISHQ9NSE2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
CISHQ9NSE2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CISHQ9NSE2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC234779.1-201ENST00000425910 285 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC013410.1-201ENST00000436223 1232 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC093824.1-201ENST00000508796 343 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC006499.6-201ENST00000511169 607 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 RN7SKP122-201ENST00000515923 296 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC138701.1-201ENST00000524329 714 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AP005262.1-201ENST00000582646 997 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC006116.5-201ENST00000591936 559 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 AC083809.1-201ENST00000615051 472 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 AL023881.1-201ENST00000621088 301 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms