Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL512422.1-201ENST00000407033 553 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC013429.2-201ENST00000418798 781 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AL358176.3-201ENST00000420757 454 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 GAPDHP49-201ENST00000421421 961 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 OR52B5P-201ENST00000435337 951 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 UBE2V1P5-201ENST00000440070 405 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 RPS26P30-201ENST00000443431 335 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC005002.1-201ENST00000447458 540 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC091959.2-201ENST00000477363 321 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC073522.1-201ENST00000483312 377 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC110760.3-202ENST00000515177 371 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 RPL23AP53-201ENST00000521854 457 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 IGJP1-201ENST00000522682 475 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 OR4A2P-201ENST00000527276 913 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 VN1R74P-201ENST00000613259 503 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 OR52B5P-202ENST00000641118 1110 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC104260.2-201ENST00000623551 3497 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AL512646.1-201ENST00000269395 1077 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 Y_RNA.578-201ENST00000390903 88 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 RN7SKP114-201ENST00000410327 279 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 TAF13P2-201ENST00000416876 286 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 RPS26P40-201ENST00000435209 294 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MTCO1P53-201ENST00000441633 699 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MTND1P33-201ENST00000446251 917 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AL354714.3-201ENST00000447284 493 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 RN7SL515P-201ENST00000463999 297 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC009127.1-201ENST00000467090 155 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 TRAV31-201ENST00000502780 342 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC008837.1-201ENST00000511513 412 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 RNU6-1028P-201ENST00000517164 93 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AP006245.2-201ENST00000522004 300 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC139103.1-201ENST00000534696 1030 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AL442163.2-201ENST00000553912 710 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC012146.2-201ENST00000576545 416 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MTCO2P2-201ENST00000591258 225 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC011445.2-201ENST00000599274 173 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC112220.2-201ENST00000605513 533 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AL512329.2-201ENST00000607350 548 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms