Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC062016.2-201ENST00000420950 676 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC073587.1-201ENST00000447093 876 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 NDUFA5P12-201ENST00000503796 343 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC091917.2-201ENST00000505002 744 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 OR7H2P-201ENST00000513483 306 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 OR5M2P-201ENST00000529003 936 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC110743.1-201ENST00000584870 478 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC008759.1-201ENST00000589783 983 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC103792.1-201ENST00000603591 919 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC091979.2-201ENST00000607514 214 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC017076.1-201ENST00000607613 578 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AP002360.3-201ENST00000607673 710 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC079298.2-201ENST00000623885 459 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 LINC00622-201ENST00000562811 1570 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC139769.1-204ENST00000472297 1931 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CPHL1P-201ENST00000461341 3407 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 RNU1-63P-201ENST00000383902 164 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 NDUFA5P10-201ENST00000432147 357 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 YWHAZP2-201ENST00000440317 728 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AL157827.1-201ENST00000447622 132 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 EIF2S2P5-201ENST00000457635 968 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC090013.1-201ENST00000485147 480 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC083982.1-201ENST00000485679 344 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC093270.2-201ENST00000486157 792 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 RPL32P9-201ENST00000487963 407 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 IGLV2-34-201ENST00000490007 283 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 RPS27AP16-201ENST00000492222 470 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC021087.2-201ENST00000504656 1203 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 PCNAP1-201ENST00000505363 709 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 ACTR6P1-201ENST00000514311 1104 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 SNORA70.17-201ENST00000516449 133 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 OR5D15P-201ENST00000531671 942 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 NXPH1-205ENST00000602349 1953 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 FAM25E-202ENST00000608562 189 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 AL353726.1-201ENST00000614041 1000 ntBASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.59□□□□□ -1.67
LRRC40Q9H9A6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.59□□□□□ -1.68
LRRC40Q9H9A6 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.68
LRRC40Q9H9A6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
LRRC40Q9H9A6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC027290.2-201ENST00000623210 18662 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 LINC01109-201ENST00000603837 3081 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms