Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPL7P39-201ENST00000481157 744 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC109486.1-201ENST00000486833 374 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC108043.1-201ENST00000512696 574 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 RNU6-1334P-201ENST00000516032 105 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC122688.1-201ENST00000541494 223 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 HAUS8P1-201ENST00000549005 542 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC097505.1-201ENST00000610199 565 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC126915.2-201ENST00000610957 190 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC037198.3-201ENST00000616754 526 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC118658.2-201ENST00000618697 459 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 SAMMSON-227ENST00000642114 1199 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AL078595.2-201ENST00000605309 1780 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 Y_RNA.41-201ENST00000362646 102 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 DUTP5-201ENST00000406790 469 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 RNF10P1-201ENST00000418589 369 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AL139421.1-201ENST00000423010 169 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AL512326.1-201ENST00000443050 721 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC023512.1-201ENST00000444513 499 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 RPL21P134-201ENST00000453468 483 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 RPS18P6-201ENST00000476880 458 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 RN7SL826P-201ENST00000479724 288 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC231760.1-201ENST00000498002 260 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC108120.2-201ENST00000512973 294 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC018618.2-201ENST00000604770 446 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC126118.1-201ENST00000607744 628 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC093388.1-201ENST00000609166 430 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC008443.7-201ENST00000622195 246 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 RPL23AP61-201ENST00000623642 466 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 OR55B1P-203ENST00000641518 2602 ntBASIC6.11□□□□□ -1.43
BCAS3Q9H6U6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 OR4F13P-202ENST00000560066 2054 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 RNU6-500P-201ENST00000362349 107 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 U3.4-201ENST00000363352 213 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 RNU6-694P-201ENST00000364071 147 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 AC108075.1-201ENST00000424692 529 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 OR5AW1P-201ENST00000426334 1006 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 FAM96AP1-201ENST00000430879 482 ntBASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.1□□□□□ -1.43
BCAS3Q9H6U6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms