Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC093909.5-201ENST00000621839 1799 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC099654.2-201ENST00000433031 1980 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AL359643.1-201ENST00000404109 423 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RPS16P5-201ENST00000406501 404 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 MIR1271-201ENST00000408537 86 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RAB9AP4-201ENST00000415230 609 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ARL2BPP3-201ENST00000421226 480 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC004074.1-201ENST00000421810 1063 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AL606495.1-201ENST00000422100 813 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC073264.2-201ENST00000448886 166 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC112492.1-201ENST00000449607 712 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 MTND1P27-201ENST00000451117 902 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 NPM1P29-201ENST00000483112 803 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RPL23AP72-201ENST00000492447 435 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 MTND4P2-201ENST00000507767 1203 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RNU5A-7P-201ENST00000515979 116 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RAB9BP1-201ENST00000519581 626 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AP006289.1-201ENST00000538089 277 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 PIGPP4-201ENST00000584447 307 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 PCNAP1-202ENST00000595299 752 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC005377.1-201ENST00000605126 456 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AP001521.2-201ENST00000608772 546 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 Z95327.3-201ENST00000610385 572 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC022306.2-201ENST00000617563 647 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 MTND4P4-201ENST00000439033 1366 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 SMG1P7-201ENST00000565246 2704 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC008549.2-201ENST00000333482 706 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC007068.1-201ENST00000396690 844 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 ATP5F1P2-201ENST00000398143 760 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LRRC37BP1-201ENST00000398851 714 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 HMGB3P7-201ENST00000400214 611 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RPS4XP9-201ENST00000405151 780 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 Z86062.1-201ENST00000406773 777 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 SNORA77-201ENST00000408716 125 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RN7SKP16-201ENST00000410180 299 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RNA5SP113-201ENST00000410486 84 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AL445213.1-201ENST00000412589 747 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 CBX1P3-201ENST00000413296 527 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RANP4-201ENST00000413361 655 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC009518.2-201ENST00000418056 731 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MTND4LP13-201ENST00000425022 298 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 FTLP19-201ENST00000433300 394 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AL035246.1-201ENST00000433554 1255 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 KATNBL1P3-201ENST00000443475 909 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC105918.1-201ENST00000474399 838 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RN7SL346P-201ENST00000491561 294 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms