Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC006042.3-201ENST00000454684 1469 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS11Q9H270 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 MAPK10-328ENST00000641553 4009 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS11Q9H270 TTC39DP-201ENST00000416781 1688 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 QRSL1P1-201ENST00000400977 1540 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 TMSB4XP2-201ENST00000335179 210 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AL121886.1-201ENST00000358609 435 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 SNORA51.9-201ENST00000384295 124 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 RN7SKP29-201ENST00000410957 272 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 NPM1P11-201ENST00000417106 855 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 THEM7P-201ENST00000419556 672 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 MTCO2P34-201ENST00000421994 607 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS11Q9H270 TUBB4BP6-201ENST00000437576 479 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS11Q9H270 KF459542.1-201ENST00000450908 553 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 GEMIN2P1-201ENST00000454246 752 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 NECAP1P2-201ENST00000455668 727 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS11Q9H270 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC113430.1-201ENST00000506872 718 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AC114781.4-201ENST00000513707 639 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 Y_RNA.695-201ENST00000516715 107 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS11Q9H270 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS11Q9H270 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS11Q9H270 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS11Q9H270 RPS3AP4-201ENST00000555161 764 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC092325.1-201ENST00000566449 554 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AC074051.3-201ENST00000570238 358 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AC127024.5-201ENST00000580085 462 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 MIR4776-2-201ENST00000580204 80 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC079089.3-201ENST00000603094 673 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS11Q9H270 MIR6809-201ENST00000612189 116 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC092794.2-201ENST00000620933 563 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 AL356121.2-201ENST00000624715 780 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 LINC01808-202ENST00000641680 1116 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 MRE11P1-201ENST00000464884 2127 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS11Q9H270 RPS4XP5-202ENST00000449995 1334 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VPS11Q9H270 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS11Q9H270 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS11Q9H270 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.69□□□□□ -1.5
VPS11Q9H270 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS11Q9H270 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC027228.2-201ENST00000567141 2154 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS11Q9H270 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS11Q9H270 RNA5SP326-201ENST00000363209 110 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 U3.7-201ENST00000363668 216 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 RNU6-317P-201ENST00000384031 107 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 MIR130A-201ENST00000385274 89 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC005042.1-201ENST00000393397 800 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 DEFB108C-201ENST00000400154 252 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms