Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNA5SP322-201ENST00000363617 119 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 RPS23P10-201ENST00000416185 486 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 NDUFA5P1-201ENST00000433858 341 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC092647.3-201ENST00000443044 633 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC112498.1-201ENST00000444401 332 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 OR1H1P-201ENST00000448731 937 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 DDX39BP2-208ENST00000453923 258 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC104763.1-201ENST00000475274 360 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC109462.1-201ENST00000491087 368 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 RPL36AP41-201ENST00000493820 306 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 OR10G5P-201ENST00000532733 358 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 OR5AN2P-201ENST00000534535 896 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC006116.3-201ENST00000592968 361 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC090953.1-201ENST00000604305 1092 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AP002360.3-201ENST00000607673 710 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AL121612.2-201ENST00000612261 482 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC007546.2-201ENST00000623996 360 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC009313.2-201ENST00000417893 1941 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 SNORA62.2-201ENST00000364672 152 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 RHEBP3-201ENST00000411920 351 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 CHEK2P3-201ENST00000416118 248 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 PRELID3BP10-201ENST00000431957 584 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 HMGB3P21-201ENST00000452483 547 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 SETP20-201ENST00000457046 852 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 PPIAP15-201ENST00000479662 484 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 GAPDHP56-201ENST00000506031 988 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC017037.1-201ENST00000508460 471 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC141257.3-201ENST00000572906 215 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC090181.2-201ENST00000602975 672 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AC010201.1-201ENST00000605051 540 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 OR8A1-204ENST00000642111 1145 ntBASIC3.29□□□□□ -1.88
AP1S3Q96PC3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
AP1S3Q96PC3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC233968.1-201ENST00000611212 1300 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RPL23P2-201ENST00000320371 421 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms