Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 U3.7-201ENST00000363668 216 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SKP269-201ENST00000365545 319 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6-1242P-201ENST00000391052 103 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO2P31-201ENST00000402702 684 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 NUDT19P3-201ENST00000404698 555 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL035079.1-201ENST00000405210 287 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MIR1182-201ENST00000408363 97 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC009302.1-201ENST00000417147 390 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 EI24P4-201ENST00000423683 1078 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC009238.2-201ENST00000431026 355 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RPL7P29-201ENST00000437151 728 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC073052.1-201ENST00000440417 714 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RPL31P44-201ENST00000447680 377 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SL172P-201ENST00000460535 303 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 RPL21P6-201ENST00000479171 504 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MIR4489-201ENST00000578869 62 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL035411.2-201ENST00000604022 421 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MIR6862-1-201ENST00000613016 70 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MIR6862-2-201ENST00000614755 70 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MIR6826-201ENST00000617808 98 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 STMN1P1-201ENST00000617809 440 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AL121895.2-201ENST00000619558 447 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 CU459211.1-201ENST00000635667 749 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 AC111188.2-201ENST00000529697 1387 ntBASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 SNORA51.1-201ENST00000363243 140 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SKP113-201ENST00000363891 295 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6-353P-201ENST00000364266 108 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6-304P-201ENST00000364855 107 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MIR223-201ENST00000385204 110 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO1P56-201ENST00000401674 224 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AL136310.1-201ENST00000404926 654 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 NCSTNP1-201ENST00000406229 144 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 COX5BP7-201ENST00000414780 274 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AL513175.2-201ENST00000422071 443 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC010099.3-201ENST00000423896 409 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 C1DP1-201ENST00000426049 402 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 EEF1A1P39-201ENST00000440791 250 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MTCYBP42-201ENST00000444653 1130 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 HMGB3P6-201ENST00000444896 598 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC004022.1-201ENST00000447766 1066 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AURKAPS1-201ENST00000451805 1212 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RPS6P2-201ENST00000454208 705 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 OR2AF1P-201ENST00000454899 889 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SL443P-201ENST00000464331 290 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 COPS8P2-201ENST00000473228 627 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SL809P-201ENST00000482040 297 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 NIFKP7-201ENST00000503365 834 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC104108.1-201ENST00000509930 412 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 PRELID3BP4-201ENST00000515476 571 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms