Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL137845.2-201ENST00000444292 988 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 REG1CP-206ENST00000447469 496 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 PTGES3P5-201ENST00000455109 434 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RPL23AP12-201ENST00000467573 473 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RN7SL189P-201ENST00000468631 289 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RN7SL459P-201ENST00000481078 302 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC022133.1-201ENST00000490961 571 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC021146.5-201ENST00000503544 545 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC006427.1-201ENST00000514359 712 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LRRC34P1-201ENST00000542742 915 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC105254.2-201ENST00000603636 436 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL035411.2-201ENST00000604022 421 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC009948.4-201ENST00000604692 675 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RNA5SP439-201ENST00000617595 124 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 VN1R7P-201ENST00000619242 903 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC097655.1-201ENST00000635075 318 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 OR6C71P-202ENST00000641886 1107 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC006042.3-201ENST00000454684 1469 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC093671.1-201ENST00000624981 2929 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 RNU1-87P-201ENST00000363727 170 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL590290.1-201ENST00000405336 380 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC019050.1-201ENST00000418508 492 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 RPS3AP37-201ENST00000419176 745 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL354766.1-201ENST00000423396 542 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC099670.2-201ENST00000435130 321 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 HMGB1P45-201ENST00000435986 653 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 MTND2P40-201ENST00000436718 841 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 NDUFA12P1-201ENST00000455914 406 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC063943.1-201ENST00000465434 453 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC068587.2-201ENST00000478386 781 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 RPL21P6-201ENST00000479171 504 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 RN7SL319P-201ENST00000480656 221 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 PRELID3BP5-201ENST00000508612 460 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 RAB9BP1-201ENST00000519581 626 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 NMNAT1P1-201ENST00000554095 876 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 CCDC58P3-201ENST00000590792 430 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC108738.1-201ENST00000603703 237 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL138478.1-201ENST00000612252 832 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 VN1R74P-201ENST00000613259 503 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC079395.3-201ENST00000615161 484 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL731566.2-201ENST00000618971 317 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC006840.1-201ENST00000623069 542 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AC015726.3-201ENST00000624501 418 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 MTND4P31-201ENST00000425607 1343 ntBASIC5.16□□□□□ -1.58
HMGB4Q8WW32 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB4Q8WW32 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms