Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC025554.1-201ENST00000505641 188 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC007066.2-202ENST00000566531 914 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC018816.2-201ENST00000621460 353 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC091905.2-201ENST00000623143 306 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL049536.1-201ENST00000625043 744 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 MIR1911-201ENST00000410783 80 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 RPL7AP52-201ENST00000458096 790 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL132838.2-201ENST00000492041 314 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 IFITM8P-201ENST00000522529 394 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC008759.1-201ENST00000589783 983 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL160290.3-201ENST00000604869 165 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 SNX18P1Y-201ENST00000616231 511 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 MAPK10-349ENST00000641767 3661 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 MUC2-202ENST00000613187 4845 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 DYNLL1P7-201ENST00000429273 258 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 RPL7P15-201ENST00000461190 712 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AF213884.1-201ENST00000488102 463 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AL121890.2-201ENST00000617644 465 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 AC140113.4-201ENST00000622087 222 ntBASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM3Q8TF72 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 CYCSP10-201ENST00000417973 294 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC004448.2-201ENST00000422360 586 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC091959.2-201ENST00000477363 321 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 PHBP17-201ENST00000528576 541 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC063952.1-203ENST00000634410 658 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 RCC2P2-201ENST00000422174 918 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AP000827.1-201ENST00000527814 258 ntBASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM3Q8TF72 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms