Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MIR5187-201ENST00000583479 76 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC115621.1-201ENST00000604653 858 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC114878.2-201ENST00000604863 1251 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 EIF3EP2-201ENST00000423042 1814 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MTND5P1-201ENST00000445440 1375 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 TEX41-206ENST00000432608 661 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL133244.1-201ENST00000456007 258 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC110743.1-201ENST00000584870 478 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AP000648.2-201ENST00000624182 404 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MAPK10-303ENST00000641324 3959 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 DMD-202ENST00000343523 5623 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 LINC02035-201ENST00000610128 5476 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 RN7SKP182-201ENST00000410772 298 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL157385.1-201ENST00000446973 268 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 BX510359.1-201ENST00000456973 237 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 MYL12BP2-201ENST00000503948 512 ntBASIC2.88□□□□□ -1.95
CSMD3Q7Z407 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD3Q7Z407 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AC010168.2-201ENST00000562691 5428 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 MIR128-1-201ENST00000384921 82 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 CTSL3P-202ENST00000412179 788 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL391219.1-201ENST00000422570 483 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 GTF2IP8-201ENST00000560687 584 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AC079880.2-201ENST00000603790 1213 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AP001002.2-201ENST00000625137 386 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL603766.1-201ENST00000407763 664 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AC005300.1-201ENST00000428401 373 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 OR9M1P-201ENST00000459641 921 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 RNA5SP116-201ENST00000516132 98 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 RN7SKP289-201ENST00000517244 295 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 LRRC37A9P-201ENST00000603850 5376 ntBASIC2.87□□□□□ -1.95
CSMD3Q7Z407 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD3Q7Z407 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RPL12P46-201ENST00000436610 195 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC110792.1-201ENST00000491826 472 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 UBE2CP3-201ENST00000502715 450 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 HPRT1P2-201ENST00000505250 544 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms