Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCL20P78556 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCL20P78556 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCL20P78556 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCL20P78556 USP9YP4-201ENST00000424401 1745 ntBASIC3.31□□□□□ -1.88
CCL20P78556 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCL20P78556 RNA5SP191-201ENST00000362585 102 ntBASIC3.31□□□□□ -1.88
CCL20P78556 RNU1-18P-201ENST00000363062 164 ntBASIC3.31□□□□□ -1.88
CCL20P78556 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCL20P78556 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 RHEBP3-201ENST00000411920 351 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 ELOCP10-201ENST00000440624 327 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC114495.1-201ENST00000441274 436 ntBASIC3.31□□□□□ -1.88
CCL20P78556 VN1R25P-201ENST00000443385 738 ntBASIC3.31□□□□□ -1.88
CCL20P78556 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 VN1R40P-201ENST00000455196 941 ntBASIC3.31□□□□□ -1.88
CCL20P78556 NDUFA5P5-201ENST00000468361 342 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 BNIP3P41-201ENST00000503774 571 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC092349.1-201ENST00000504903 310 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 NDUFB4P12-201ENST00000513465 390 ntBASIC3.31□□□□□ -1.88
CCL20P78556 RNA5SP473-201ENST00000516402 125 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 VTA1P2-201ENST00000520205 911 ntBASIC3.31□□□□□ -1.88
CCL20P78556 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AP001880.2-201ENST00000538233 448 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 AC063950.1-201ENST00000552036 308 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AL110118.1-201ENST00000553543 400 ntBASIC3.31□□□□□ -1.88
CCL20P78556 MRPS35P3-201ENST00000603189 709 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AC123786.2-201ENST00000603459 275 ntBASIC3.31□□□□□ -1.88
CCL20P78556 ELOCP34-201ENST00000604436 327 ntBASIC3.31□□□□□ -1.88
CCL20P78556 AP000255.1-201ENST00000610276 676 ntBASIC3.31□□□□□ -1.88
CCL20P78556 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.31□□□□□ -1.88
CCL20P78556 AP003400.2-201ENST00000624036 666 ntBASIC3.31□□□□□ -1.88
CCL20P78556 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.31□□□□□ -1.88
CCL20P78556 LINC01739-205ENST00000641890 573 ntBASIC3.31□□□□□ -1.88
CCL20P78556 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCL20P78556 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCL20P78556 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.31□□□□□ -1.88
CCL20P78556 AL451142.2-201ENST00000429076 2090 ntBASIC3.31□□□□□ -1.88
CCL20P78556 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.31□□□□□ -1.88
CCL20P78556 AC009313.2-201ENST00000417893 1941 ntBASIC3.31□□□□□ -1.88
CCL20P78556 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.3□□□□□ -1.88
CCL20P78556 AC006504.1-201ENST00000562493 3666 ntBASIC3.3□□□□□ -1.88
CCL20P78556 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCL20P78556 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.3□□□□□ -1.88
CCL20P78556 RPS4XP5-202ENST00000449995 1334 ntBASIC3.3□□□□□ -1.88
CCL20P78556 OR11H4-201ENST00000315409 1082 ntBASIC3.3□□□□□ -1.88
CCL20P78556 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCL20P78556 RNU4-7P-201ENST00000364758 141 ntBASIC3.3□□□□□ -1.88
CCL20P78556 RN7SKP187-201ENST00000365536 330 ntBASIC3.3□□□□□ -1.88
CCL20P78556 MIR143-201ENST00000385300 106 ntBASIC3.3□□□□□ -1.88
CCL20P78556 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCL20P78556 RNA5SP178-201ENST00000410380 128 ntBASIC3.3□□□□□ -1.88
CCL20P78556 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.3□□□□□ -1.88
CCL20P78556 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.3□□□□□ -1.88
CCL20P78556 AL139095.3-201ENST00000419672 1203 ntBASIC3.3□□□□□ -1.88
CCL20P78556 AC093698.1-201ENST00000423843 571 ntBASIC3.3□□□□□ -1.88
CCL20P78556 NPM1P34-201ENST00000428821 893 ntBASIC3.3□□□□□ -1.88
CCL20P78556 AL365396.1-201ENST00000430854 671 ntBASIC3.3□□□□□ -1.88
CCL20P78556 NRBF2P3-201ENST00000432731 865 ntBASIC3.3□□□□□ -1.88
CCL20P78556 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.3□□□□□ -1.88
CCL20P78556 AL132765.1-201ENST00000434165 553 ntBASIC3.3□□□□□ -1.88
CCL20P78556 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.3□□□□□ -1.88
CCL20P78556 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.3□□□□□ -1.88
CCL20P78556 AL356390.1-201ENST00000455684 397 ntBASIC3.3□□□□□ -1.88
CCL20P78556 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.3□□□□□ -1.88
CCL20P78556 RPL23AP72-201ENST00000492447 435 ntBASIC3.3□□□□□ -1.88
CCL20P78556 RN7SL812P-201ENST00000493791 279 ntBASIC3.3□□□□□ -1.88
CCL20P78556 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.3□□□□□ -1.88
CCL20P78556 AC083829.1-201ENST00000503756 657 ntBASIC3.3□□□□□ -1.88
CCL20P78556 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.3□□□□□ -1.88
CCL20P78556 BTF3P13-201ENST00000513224 490 ntBASIC3.3□□□□□ -1.88
CCL20P78556 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCL20P78556 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.3□□□□□ -1.88
CCL20P78556 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.3□□□□□ -1.88
CCL20P78556 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.3□□□□□ -1.88
CCL20P78556 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.3□□□□□ -1.88
CCL20P78556 SNORD95-201ENST00000579879 68 ntBASIC3.3□□□□□ -1.88
CCL20P78556 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CCL20P78556 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.3□□□□□ -1.88
CCL20P78556 AL139286.1-201ENST00000604465 483 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms