Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR3922-201ENST00000585192 84 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKDCP78527 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 CASC19-206ENST00000641028 1430 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 AC010329.1-201ENST00000593903 8328 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 RPL21P23-201ENST00000446654 460 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 AC005726.1-201ENST00000494679 427 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKDCP78527 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 AC068722.2-201ENST00000618734 544 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 CROT-204ENST00000442291 1993 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 DMD-202ENST00000343523 5623 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 HSFY4P-201ENST00000415994 1181 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 RPL35AP21-201ENST00000437667 333 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKDCP78527 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKDCP78527 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 AC006023.1-201ENST00000603944 259 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 SNORA3C-201ENST00000408792 125 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 AC092641.1-201ENST00000440229 772 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKDCP78527 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKDCP78527 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PRKDCP78527 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 MFSD8-242ENST00000641690 4199 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKDCP78527 RN7SL809P-201ENST00000482040 297 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AC108145.1-201ENST00000503770 153 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKDCP78527 AL137849.1-201ENST00000604767 169 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AC015914.2-201ENST00000618167 288 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 DDX18P5-201ENST00000534547 1306 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 AP000542.2-201ENST00000623199 6179 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 ADAM5-202ENST00000399789 1942 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKDCP78527 AL034370.1-201ENST00000397254 1590 ntBASIC2.93□□□□□ -1.94
PRKDCP78527 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 RNF19BPX-201ENST00000426224 625 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKDCP78527 AL358472.1-201ENST00000431295 329 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AL831737.1-201ENST00000441288 271 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKDCP78527 RFPL4AP5-201ENST00000514977 504 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKDCP78527 CR383656.14-201ENST00000551951 406 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AL049844.2-201ENST00000604280 628 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AC090246.1-201ENST00000616499 426 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 AL356489.2-201ENST00000566968 3528 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms