Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH13P55290 RNA5SP27-201ENST00000363839 119 ntBASIC4.7□□□□□ -1.66
CDH13P55290 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
CDH13P55290 RPL22P22-201ENST00000395439 379 ntBASIC4.7□□□□□ -1.66
CDH13P55290 Z97832.1-201ENST00000402490 328 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AL021331.1-201ENST00000402817 582 ntBASIC4.7□□□□□ -1.66
CDH13P55290 RN7SKP199-201ENST00000410325 305 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 ARL5AP2-201ENST00000444698 533 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 AC044797.1-201ENST00000445744 679 ntBASIC4.7□□□□□ -1.66
CDH13P55290 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH13P55290 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 FKBP1BP1-201ENST00000553366 325 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH13P55290 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 MIR3691-201ENST00000578066 90 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AC126365.2-201ENST00000580630 379 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH13P55290 MIR6768-201ENST00000610734 72 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AC243654.2-201ENST00000612843 443 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AC073569.3-201ENST00000619055 682 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 AL391262.2-201ENST00000622466 494 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AL049777.1-201ENST00000622740 518 ntBASIC4.7□□□□□ -1.66
CDH13P55290 PHKBP1-201ENST00000450951 1951 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 RNF6P1-201ENST00000444889 1784 ntBASIC4.7□□□□□ -1.66
CDH13P55290 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 SEC63P2-201ENST00000503863 1939 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH13P55290 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 AC090017.1-201ENST00000548612 1779 ntBASIC4.69□□□□□ -1.66
CDH13P55290 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH13P55290 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 RNU1-106P-201ENST00000384382 164 ntBASIC4.69□□□□□ -1.66
CDH13P55290 NCSTNP1-201ENST00000406229 144 ntBASIC4.69□□□□□ -1.66
CDH13P55290 RN7SKP247-201ENST00000411094 308 ntBASIC4.69□□□□□ -1.66
CDH13P55290 RN7SKP273-201ENST00000411392 314 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC069282.1-201ENST00000411911 526 ntBASIC4.69□□□□□ -1.66
CDH13P55290 GSTM3P2-201ENST00000412746 530 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH13P55290 GTF2IP5-201ENST00000414608 731 ntBASIC4.69□□□□□ -1.66
CDH13P55290 MTND4P11-201ENST00000417020 1058 ntBASIC4.69□□□□□ -1.66
CDH13P55290 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 HSFY7P-201ENST00000432672 318 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH13P55290 AL451139.1-201ENST00000434718 346 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AL031663.1-201ENST00000437445 219 ntBASIC4.69□□□□□ -1.66
CDH13P55290 HSFY8P-201ENST00000437934 318 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 MRPL48P1-201ENST00000445390 636 ntBASIC4.69□□□□□ -1.66
CDH13P55290 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 RPL7L1P1-201ENST00000448259 785 ntBASIC4.69□□□□□ -1.66
CDH13P55290 HMGN1P5-201ENST00000448591 263 ntBASIC4.69□□□□□ -1.66
CDH13P55290 HSFY5P-201ENST00000453726 309 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AL035407.2-201ENST00000454090 378 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 NAMPTP2-201ENST00000505629 1115 ntBASIC4.69□□□□□ -1.66
CDH13P55290 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH13P55290 AC010285.3-201ENST00000511668 676 ntBASIC4.69□□□□□ -1.66
CDH13P55290 RNA5SP92-201ENST00000516437 110 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 AC010476.1-201ENST00000519111 851 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 AL121594.4-201ENST00000556211 1196 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 MIR3176-201ENST00000582210 90 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 AC006116.3-201ENST00000592968 361 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC125494.3-201ENST00000602759 455 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC116447.1-201ENST00000613153 453 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AC022467.1-201ENST00000614738 749 ntBASIC4.69□□□□□ -1.66
CDH13P55290 STMN1P1-201ENST00000617809 440 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms