Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH12P55289 MOB1AP1-201ENST00000430903 535 ntBASIC4.72□□□□□ -1.65
CDH12P55289 CYCSP11-201ENST00000436426 315 ntBASIC4.72□□□□□ -1.65
CDH12P55289 RPL7P29-201ENST00000437151 728 ntBASIC4.72□□□□□ -1.65
CDH12P55289 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH12P55289 RPS26P30-201ENST00000443431 335 ntBASIC4.72□□□□□ -1.65
CDH12P55289 SETD6P1-201ENST00000444575 317 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH12P55289 AC005002.1-201ENST00000447458 540 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 USP9YP25-201ENST00000457708 443 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC023141.9-201ENST00000458734 412 ntBASIC4.72□□□□□ -1.65
CDH12P55289 RNA5SP103-201ENST00000459503 118 ntBASIC4.72□□□□□ -1.65
CDH12P55289 RN7SL717P-201ENST00000478343 297 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC091951.3-201ENST00000504093 246 ntBASIC4.72□□□□□ -1.65
CDH12P55289 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH12P55289 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 MTCO3P15-201ENST00000526563 574 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC023050.2-201ENST00000544968 387 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC068993.1-201ENST00000546724 589 ntBASIC4.72□□□□□ -1.65
CDH12P55289 ZNF321P-202ENST00000550843 495 ntBASIC4.72□□□□□ -1.65
CDH12P55289 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 DUXAP6-201ENST00000553858 601 ntBASIC4.72□□□□□ -1.65
CDH12P55289 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 NDUFB4P11-201ENST00000560510 395 ntBASIC4.72□□□□□ -1.65
CDH12P55289 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 AC009094.1-201ENST00000564443 426 ntBASIC4.72□□□□□ -1.65
CDH12P55289 MTCO1P40-201ENST00000574371 625 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH12P55289 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH12P55289 AL392112.1-201ENST00000605115 829 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC007349.4-201ENST00000608114 532 ntBASIC4.72□□□□□ -1.65
CDH12P55289 VN1R7P-201ENST00000619242 903 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC091304.6-201ENST00000619761 202 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC015660.5-201ENST00000623238 564 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC112694.2-201ENST00000623697 768 ntBASIC4.72□□□□□ -1.65
CDH12P55289 SNORA17.5-201ENST00000630429 132 ntBASIC4.72□□□□□ -1.65
CDH12P55289 LINC02211-204ENST00000642024 1070 ntBASIC4.72□□□□□ -1.65
CDH12P55289 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH12P55289 AC093311.1-201ENST00000506586 2021 ntBASIC4.72□□□□□ -1.65
CDH12P55289 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.72□□□□□ -1.65
CDH12P55289 MTCO1P15-201ENST00000529569 1526 ntBASIC4.72□□□□□ -1.65
CDH12P55289 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CDH12P55289 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.71□□□□□ -1.65
CDH12P55289 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.71□□□□□ -1.65
CDH12P55289 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
CDH12P55289 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH12P55289 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CDH12P55289 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDH12P55289 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH12P55289 AL049545.1-201ENST00000401856 572 ntBASIC4.71□□□□□ -1.66
CDH12P55289 SETP15-201ENST00000412724 337 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH12P55289 RPL36AP10-201ENST00000421785 322 ntBASIC4.71□□□□□ -1.66
CDH12P55289 EI24P4-201ENST00000423683 1078 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC093655.2-201ENST00000425735 631 ntBASIC4.71□□□□□ -1.66
CDH12P55289 RPS6P15-201ENST00000431996 751 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 Z83846.1-201ENST00000446798 265 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC004980.3-201ENST00000447046 365 ntBASIC4.71□□□□□ -1.66
CDH12P55289 PTENP1-201ENST00000447117 1215 ntBASIC4.71□□□□□ -1.66
CDH12P55289 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH12P55289 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH12P55289 RPL5P22-201ENST00000480199 884 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC073073.1-201ENST00000493920 463 ntBASIC4.71□□□□□ -1.66
CDH12P55289 RPS4XP20-201ENST00000505751 772 ntBASIC4.71□□□□□ -1.66
CDH12P55289 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH12P55289 AC008565.1-201ENST00000509046 885 ntBASIC4.71□□□□□ -1.66
CDH12P55289 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 AC027308.1-201ENST00000517993 110 ntBASIC4.71□□□□□ -1.66
CDH12P55289 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH12P55289 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 AL132657.2-201ENST00000564417 358 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH12P55289 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms