Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 AC012254.4-201ENST00000588843 273 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC069431.2-201ENST00000604149 1099 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC018754.1-201ENST00000607486 925 ntBASIC4.5□□□□□ -1.69
CDH11P55287 OR2BH1P-201ENST00000608850 864 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL049539.1-201ENST00000611964 459 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL512427.1-201ENST00000618593 349 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC084824.4-201ENST00000620106 731 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC083865.1-201ENST00000636634 831 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC006927.2-201ENST00000639256 389 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC119674.1-212ENST00000641155 993 ntBASIC4.5□□□□□ -1.69
CDH11P55287 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 PANDAR-201ENST00000629595 1506 ntBASIC4.5□□□□□ -1.69
CDH11P55287 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 DDX18P5-201ENST00000534547 1306 ntBASIC4.49□□□□□ -1.69
CDH11P55287 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDH11P55287 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH11P55287 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 RN7SKP103-201ENST00000363848 320 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL034374.1-201ENST00000406329 351 ntBASIC4.49□□□□□ -1.69
CDH11P55287 SNORA77-201ENST00000408716 125 ntBASIC4.49□□□□□ -1.69
CDH11P55287 RNU6-584P-201ENST00000410350 95 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL139128.1-201ENST00000413921 941 ntBASIC4.49□□□□□ -1.69
CDH11P55287 MTCO3P4-201ENST00000419236 787 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 DDX39BP1-205ENST00000422507 192 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC115285.1-201ENST00000424879 736 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH11P55287 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 FABP7P2-201ENST00000429946 379 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC092162.1-201ENST00000432828 434 ntBASIC4.49□□□□□ -1.69
CDH11P55287 NMNAT1P2-201ENST00000435192 860 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH11P55287 AC092647.2-201ENST00000452998 253 ntBASIC4.49□□□□□ -1.69
CDH11P55287 HIGD1AP8-201ENST00000453927 274 ntBASIC4.49□□□□□ -1.69
CDH11P55287 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH11P55287 AC108729.1-201ENST00000487812 947 ntBASIC4.49□□□□□ -1.69
CDH11P55287 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 AC110775.1-201ENST00000513721 462 ntBASIC4.49□□□□□ -1.69
CDH11P55287 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 OR5D15P-201ENST00000531671 942 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC087894.1-201ENST00000538359 518 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.49□□□□□ -1.69
CDH11P55287 AL358913.1-201ENST00000554342 121 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH11P55287 OR1F2P-201ENST00000570470 933 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL606834.3-201ENST00000602615 496 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 RNF138P2-201ENST00000603490 592 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL049844.2-201ENST00000604280 628 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC079610.2-201ENST00000604818 690 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AP002802.2-201ENST00000605877 235 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC133644.2-201ENST00000608142 540 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC097505.1-201ENST00000610199 565 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AL136295.6-201ENST00000610486 658 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AP001784.1-201ENST00000624107 428 ntBASIC4.49□□□□□ -1.69
CDH11P55287 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH11P55287 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH11P55287 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH11P55287 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH11P55287 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH11P55287 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
CDH11P55287 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH11P55287 THAP12P4-201ENST00000528321 2266 ntBASIC4.48□□□□□ -1.69
CDH11P55287 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 AC015813.6-201ENST00000624409 5808 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC009643.2-201ENST00000603543 1448 ntBASIC4.48□□□□□ -1.69
CDH11P55287 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH11P55287 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH11P55287 RNU5E-10P-201ENST00000363506 118 ntBASIC4.48□□□□□ -1.69
CDH11P55287 RNU5B-4P-201ENST00000363508 111 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC234772.1-201ENST00000377927 937 ntBASIC4.48□□□□□ -1.69
CDH11P55287 MIR585-201ENST00000384887 94 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AP002784.2-201ENST00000397300 549 ntBASIC4.48□□□□□ -1.69
CDH11P55287 HMGB3P7-201ENST00000400214 611 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC096533.1-201ENST00000411645 353 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms