Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR8I1P-201ENST00000529291 931 ntBASIC5.4□□□□□ -1.54
COPB1P53618 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 HAUS8P1-201ENST00000549005 542 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 CCDC58P3-201ENST00000590792 430 ntBASIC5.4□□□□□ -1.54
COPB1P53618 PCNAP1-202ENST00000595299 752 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 RNF138P2-201ENST00000603490 592 ntBASIC5.4□□□□□ -1.54
COPB1P53618 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.4□□□□□ -1.54
COPB1P53618 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.4□□□□□ -1.54
COPB1P53618 AL121612.2-201ENST00000612261 482 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC016769.4-201ENST00000616893 535 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC099494.2-201ENST00000623371 978 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AP002505.2-201ENST00000623585 696 ntBASIC5.4□□□□□ -1.54
COPB1P53618 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.4□□□□□ -1.54
COPB1P53618 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
COPB1P53618 AL034370.1-201ENST00000397254 1590 ntBASIC5.4□□□□□ -1.55
COPB1P53618 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.4□□□□□ -1.55
COPB1P53618 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPB1P53618 PCAT14-202ENST00000627127 3935 ntBASIC5.4□□□□□ -1.55
COPB1P53618 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.4□□□□□ -1.55
COPB1P53618 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
COPB1P53618 AC099786.3-201ENST00000565735 1410 ntBASIC5.4□□□□□ -1.55
COPB1P53618 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
COPB1P53618 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPB1P53618 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPB1P53618 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPB1P53618 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPB1P53618 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPB1P53618 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPB1P53618 SNORA58B-201ENST00000364259 136 ntBASIC5.39□□□□□ -1.55
COPB1P53618 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPB1P53618 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 AP000580.1-201ENST00000404439 358 ntBASIC5.39□□□□□ -1.55
COPB1P53618 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.39□□□□□ -1.55
COPB1P53618 RPS24P7-201ENST00000416921 246 ntBASIC5.39□□□□□ -1.55
COPB1P53618 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 AC007394.1-201ENST00000421941 531 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 ZNF886P-201ENST00000450781 723 ntBASIC5.39□□□□□ -1.55
COPB1P53618 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 RPL6P9-201ENST00000466502 859 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC097484.1-201ENST00000471148 389 ntBASIC5.39□□□□□ -1.55
COPB1P53618 RPS21P4-201ENST00000487122 248 ntBASIC5.39□□□□□ -1.55
COPB1P53618 RPS27AP16-201ENST00000492222 470 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 RPL21P131-201ENST00000497298 483 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.39□□□□□ -1.55
COPB1P53618 RNU6-1028P-201ENST00000517164 93 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.39□□□□□ -1.55
COPB1P53618 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 OR7E128P-201ENST00000532736 1024 ntBASIC5.39□□□□□ -1.55
COPB1P53618 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 MTCYBP27-201ENST00000555160 670 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AC012254.4-201ENST00000588843 273 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC040904.1-201ENST00000590850 223 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC006272.2-201ENST00000594725 163 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC005377.1-201ENST00000605126 456 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC107952.2-201ENST00000606048 486 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC025175.1-201ENST00000606482 759 ntBASIC5.39□□□□□ -1.55
COPB1P53618 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.39□□□□□ -1.55
COPB1P53618 PART1_2.1-201ENST00000612397 250 ntBASIC5.39□□□□□ -1.55
COPB1P53618 OR8G7P-201ENST00000616658 848 ntBASIC5.39□□□□□ -1.55
COPB1P53618 AC026422.1-201ENST00000623961 452 ntBASIC5.39□□□□□ -1.55
COPB1P53618 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPB1P53618 AL132640.2-201ENST00000559968 1698 ntBASIC5.39□□□□□ -1.55
COPB1P53618 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
COPB1P53618 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AC107068.1-201ENST00000563286 4218 ntBASIC5.39□□□□□ -1.55
COPB1P53618 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPB1P53618 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
COPB1P53618 AC007342.7-201ENST00000624610 2337 ntBASIC5.39□□□□□ -1.55
COPB1P53618 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.38□□□□□ -1.55
COPB1P53618 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COPB1P53618 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 SNORA66-201ENST00000384792 133 ntBASIC5.38□□□□□ -1.55
COPB1P53618 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms